Gene Dhaf_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4195 
Symbol 
ID7261215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4442202 
End bp4443953 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content51% 
IMG OID643564110 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_002460638 
Protein GI219670203 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCCA CATTTTCCGG CTTAGAGTTA GCCAGACGGG CCTTGGAATC CCAGCAGATT 
GCTTTGGATA CCACAGGGCA CAATATTGCC AACGCCAACA CCATAGGTTA TACACGCCAA
GTGGTTAATT TGCAGGCGAC ATCACCCGAT AGCATCCCCG GCATGGGGCA TTACTTAAGC
ATCGGTACAG GGGTCACCGT TCAGAGCATC GAGCGGGCCC GGGATATTTT TATCGATCGG
CAATTCCGCT GGGAGAATTC CAAACAAGAG TACTGGGCAA CCCGTGAAAA TACCCTGGCG
CAGATCGAAG GGCTCCTCAA TGAACCTTCG GATAACAGCT TGAGTAATGA TTTGACCCAA
TTTTGGAGTG CCTGGAGTGT GCTGGCCAAT AATCCGGAAA ATTTAGGCGC CCGTTCCGTC
ATTTTGGAGA GAGCGGCCAC TCTCGCCGAT ACTCTCCATC ATATCGATCA GCAGATTACT
GAGGCACAAA AGAGCCTCGA CTCCAGCGTG CGGGTTCAGA TCGACCAGAT TAATAGCTAT
GCCAACCAGA TCCAGGAGCT GAATTTTCAG ATTAAGAAGG TGCAAATCAC CGGAGACAAT
CCCAATGACC TGTTGGATAA ACGGGATGCC CTGATCGATG ACCTTTCCAA GCTGGTCAAT
GTCCGGGTCG TGGAAAGCCG GGATCCTAAC TTTACAGATC GGGAAGTCAA TATCTTTAAA
TTGTACATCG GCAATGAAAA AGCCACCAAC CAGATCCTGG TCGATGATAC CAAGGCTTAT
CAGCTGGCGA CACCCGAGAC AACCGACGCA GACGGGTTAC CCTTTGCCGA AGTGAAATGG
GCTGCGGGGC ATCCTCAAGC CGGTGCTTCC GTGGACTTGG GTGAAGGTCA AGGAGAGCTT
CAGTCCAGCA TCCTGATGCG GGGTTCCGGA TTCGAGTATT CTGCAGGTGA TACCAAAGCC
ACTGCTCATC TGGCCTATCT GCGGGATCAG TTTAATCAAT TGGCCAGAGG TATCGCCGAA
GCGTTGAATG CCATTCATAG GACAGGGATA GATAAGGAAG GCAATTTCGG GGAAGATTTC
TTTACCTCTG CCGATGGAAA CCCGATTAGC GCCGGTAATA TTAAAGTGAA TCAAGATCTC
ATCGATGACC CATGGAAAAT TGCTACCGGA AAAGATAACT TCGGCGATGG AGAAATCGCC
AAAGCTCTTA GTTCTCTTGC TACAGGATGG ACAGGGCTTA CCGATTTATA CCTGAAGAAC
CCTGCAGGAA ATACTGTTCT TATCGATCCG GCCACTGGAG CGATAACCAC GGATACGGCC
GCCGGGCGGC CTATGGCTTG GGCAACGAGT GCGGATACTC CATTGAAGTA CCCTGTAGGA
CACCCTCTAG AAGGAGACCC TATTCTTATC GATCCTGCCA CCGGGACCAT AACCACGGAT
ACGGCCATCG GGAAACCTGT TGTCCTGGCT CAGACTCCGC CTTTATCGGC ATCTTCCATC
GGTGATTATT ATGGGGCAGC TCTCGCCGAA CTGGGGGTCG ATGCCCAGCA AGCCACCCGG
ATGAAGGAAA GTCAGGCCGT CCTTGTCACC CATATGTATA ATCAGCGGCA ATCCGTGGTC
GGAGTAAACA TGGATGAAGA AATTACGAAC CTGATCAAAT TCCAGAAGAG TTATACTGCG
GCAGCGCGGA TCGTGACCAT GCTGGACAGT ATGCTGGATA CTATCGTCAA TGGCATGGGT
GTTACCCGTT AG
 
Protein sequence
MRSTFSGLEL ARRALESQQI ALDTTGHNIA NANTIGYTRQ VVNLQATSPD SIPGMGHYLS 
IGTGVTVQSI ERARDIFIDR QFRWENSKQE YWATRENTLA QIEGLLNEPS DNSLSNDLTQ
FWSAWSVLAN NPENLGARSV ILERAATLAD TLHHIDQQIT EAQKSLDSSV RVQIDQINSY
ANQIQELNFQ IKKVQITGDN PNDLLDKRDA LIDDLSKLVN VRVVESRDPN FTDREVNIFK
LYIGNEKATN QILVDDTKAY QLATPETTDA DGLPFAEVKW AAGHPQAGAS VDLGEGQGEL
QSSILMRGSG FEYSAGDTKA TAHLAYLRDQ FNQLARGIAE ALNAIHRTGI DKEGNFGEDF
FTSADGNPIS AGNIKVNQDL IDDPWKIATG KDNFGDGEIA KALSSLATGW TGLTDLYLKN
PAGNTVLIDP ATGAITTDTA AGRPMAWATS ADTPLKYPVG HPLEGDPILI DPATGTITTD
TAIGKPVVLA QTPPLSASSI GDYYGAALAE LGVDAQQATR MKESQAVLVT HMYNQRQSVV
GVNMDEEITN LIKFQKSYTA AARIVTMLDS MLDTIVNGMG VTR