Gene Dhaf_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4174 
Symbol 
ID7261194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4418109 
End bp4419266 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content46% 
IMG OID643564090 
Productmethyltransferase FkbM family 
Protein accessionYP_002460618 
Protein GI219670183 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID[TIGR01444] methyltransferase, FkbM family 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAG CTGAAACACA ACAGGTACTG ATGTCGGCAA TATCGAAAAA AATGCAAAAC 
CAGCCCTTCA CGCTTGCAGG TTTCCTCGCA GATATTGCTC ACATACCTGT CTTTCTCTAT
GGGGCGGGTG CGTTTGGTCG CCAAATGTTC CGCTTGCTTG CCCAAAATGG CATTAGGGTA
CGCGGTTTTC TTGACCGCAA AGCGCAACCG GGACAAATGT TATACGGCGT TCCTGTATAT
TCGCCGGACT CAGTGGATAT TAGTCAGGAA GAGCGAAAAC GTTCGCTGCT TATTGTGTCG
ATTGTGCTGA CGCTTGAGGA AAGGATGCCG CTTTTTCAAT CCTTAAATAA ACTGGGTTTT
TCACAAGTGG TTGACGGTCA ATCTATCCGC GCCAGGGAAG TGCCATTCAG TGCAGCGTGT
TATGAGGCAA ATTGGTCGGA TAGTGAGTTG ACAGGAAAAA TCTGTGCCGC TGCGGAACTT
TTGGCCGATG GGGCAAGTCG TGAGGTTTAT GCGCGTAATT TACGTGCTCA TATTTTACGC
AATTACGATG ATTACATGGA AAGTACGGAT TGTTGTCAAT ATTTTACGGA AGATGTCCCT
TTGGCTAAAG GATTTACACG GTTCGTAGAT TGTGGCGCGT ATATTGGAGA TACATTAACG
CAACTGGTGA AAAAATTTGG CAATGTTGAG ACTTATGTTG GATTTGAGCC GGATTGCGAA
AGCTTCGGAC GGCTTGCAAG TACGGCTGCT GCGTTACGGC ATAATCTTTC CCAGGCATTT
CTCTATCCTT GTGCGGTAGG CGGAGCTAAC CAGATGGCTT CAATTATGCT TGCGGAAGGA
TCCAGCGCGC TTTCTGAATC AGGTGAAACC AGCGTTCAAG TTGTCAGCCT GGATAACGTA
TTTGTCGGCT TTGCGCCAAC ATTTATTAAG ATGGATATAG AAGGTGCTGA AGTTGCGGCA
TTGCATGGCG CGGAAAATGT CATTCGTACC TCCCGTCCCG ATCTTGCCGT TTGCATATAT
CACAATATAA GCGATTATTT TGAGATTCCG TTGCTTCTTC ATCGCTGGAA TCCGAATTAT
TTTTTTTATT TGCGCGCACA CAGCTCCTGT ACAATGGAAA CTGTACTTTA CGTGACGGAA
AGGAGAAAAC AGCAATGA
 
Protein sequence
MQLAETQQVL MSAISKKMQN QPFTLAGFLA DIAHIPVFLY GAGAFGRQMF RLLAQNGIRV 
RGFLDRKAQP GQMLYGVPVY SPDSVDISQE ERKRSLLIVS IVLTLEERMP LFQSLNKLGF
SQVVDGQSIR AREVPFSAAC YEANWSDSEL TGKICAAAEL LADGASREVY ARNLRAHILR
NYDDYMESTD CCQYFTEDVP LAKGFTRFVD CGAYIGDTLT QLVKKFGNVE TYVGFEPDCE
SFGRLASTAA ALRHNLSQAF LYPCAVGGAN QMASIMLAEG SSALSESGET SVQVVSLDNV
FVGFAPTFIK MDIEGAEVAA LHGAENVIRT SRPDLAVCIY HNISDYFEIP LLLHRWNPNY
FFYLRAHSSC TMETVLYVTE RRKQQ