| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4172 |
|---|
| Symbol | |
|---|
| ID | 7261192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4415901 |
|---|
| End bp | 4416917 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643564088 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002460616 |
|---|
| Protein GI | 219670181 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAA TTAAGCCGAT TTCCGGTGCG GAAGATCGCG TGCTGCTTGC CGAGGCATTA
CCGTTGGTTT CGCCGTTTAC GTTGAATGTA TTTCCGACAA ATGCCTGCAA TTTTAAATGT
TCTTATTGTG CTCAAAGCCT TGGTGCTGAA GCACTTGCCG CAACTTATGG GATGGACAGG
GGTTTCATGA GTTTGGAAAC TATGGAGTTG ATTGTTGAAC AAAGCAAAGC GTTTGCTCCG
TATAAGCTGT TATCTTTTAT GGGGCATGGT GAACCGCTGT TAAACAGGGA TTTGCCGAAA
ATGATTTCCC TTGCAGCGCG GGCGGGGATT GCTCAACGCA TTGAGATTAT TACTAATGCT
AGCATGCTGA CACATGAATA TGCGGATGAA TTGATTGACT CCGGTCTTAC CAACCTGCGC
GTGTCTTTAC AGGGGTTAGA TATGGAATCG TATAGGAAAA TCTGTGGTGT TGCCTTGGAT
TTTGACCGTT TTATGGAGCG TCTGGTCTAT TTTTATACCC ACAAGAAAAA AGATATGGGA
TTGTTCGTTA AAATTATGGA TGTTTCACTG CCTATCGGCG GAGCAAAAGA GTTCTATAAA
TTATTCAATA ATATTTGCGA CCGCATGTAT GTGGAGAATG TTCAGCCTGT GTATCATGCG
GTTGATGTTC ACAGCAGTAA CGGGAGTGAT CTTACGCGAT ATGATCGTTA TGGCAACGCC
CATCCGCCCA GAACGGTTTG CCCGCTTGCA TTTTTTTCGC TTGCTGTATG GCCAAATGGT
GACGTTCAAC CTTGTGACGC GATTTATAAA CCATGTGTTC TTGGCAATGT CCATAATACA
AACCTACGTG AAATGTGGGA TAGTGAACTG CTTAAACAAT TTCGTATTAG GCATTTGCGC
GGTGAGAAGG AGATCATTAC CGGTTGTTCA AACTGCTGTG CACCGGATGA TGTAAGCCAT
CCTTTGGATG CGCTGGATGA TCGCAAAGAC GAAATTTTGT GCAGATTATT TGGATAG
|
|---|
| Protein sequence | MAQIKPISGA EDRVLLAEAL PLVSPFTLNV FPTNACNFKC SYCAQSLGAE ALAATYGMDR
GFMSLETMEL IVEQSKAFAP YKLLSFMGHG EPLLNRDLPK MISLAARAGI AQRIEIITNA
SMLTHEYADE LIDSGLTNLR VSLQGLDMES YRKICGVALD FDRFMERLVY FYTHKKKDMG
LFVKIMDVSL PIGGAKEFYK LFNNICDRMY VENVQPVYHA VDVHSSNGSD LTRYDRYGNA
HPPRTVCPLA FFSLAVWPNG DVQPCDAIYK PCVLGNVHNT NLREMWDSEL LKQFRIRHLR
GEKEIITGCS NCCAPDDVSH PLDALDDRKD EILCRLFG
|
|---|
| |