Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4136 |
Symbol | |
ID | 7261156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4383948 |
End bp | 4384730 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564053 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_002460581 |
Protein GI | 219670146 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.140259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTAG CAGAATTTTT GCAATGGAAT CTCACGCTGT TCCTCCTTAT TCTCTCACGT TGGGCAGGCA TGATTATGCT GGCTCCGGTG TTTGGAGCCC GCGGGGTTCC CGCCATGGTC AAACTAGGCT TAGCGGTAAG CATTTCGATC ATCCTCTATC CGCTCATCAT GGCCGCCGGA CCCCAGATTC CCAGCGAAAC ACTGCCCTAT GCAGCACTAC TAATCAAAGA AATTGTGGTT GGCCTTGTGA TCGGCTTTGT CATTTATGCC ATCACTGCCG TATTAGAAGG GGCAGGTCAA TTAATTGACA TGCAGATGGG CTTTAATATG AGCGGAGCCA TCGATCCGAT TTTTGGTGTG CAAAGTGCGA TGATGGGTAA TTTTCAAATG ATTTTGGCCA TTATGCTCCT CCTGGCTACC AACTCTCACC ATTATCTTAT TGCGGCTATG GTCAAGAGCT ATACTTATGT CCCGATCAAT CCGGGGGCTC TCCCCCAAGG ACTTAATTAT TATATCTTTC TCATTCGGGA AATCTTCACC TTATCCGTAC AATTGGCCCT CCCCGTCATC GGTGCGTTGG TTCTGACGGA TATCGGCGTG GGGCTCTTGA TGCGCACCGT GCCCCAGATG AATATTTTTA CGGTTATCTT TCCCGTGAAG ATCATCTTCG GTTTTACCAT TCTTTTTTTG GGAATCGGCT TTTTTGGCGA AACAGTCAAC ATGCTTTTTG AGCGGGCCAT GACCTGGCTT TTAGAGCTGT ATAAAGGGTG GCAGGGAACA TGA
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Protein sequence | MGLAEFLQWN LTLFLLILSR WAGMIMLAPV FGARGVPAMV KLGLAVSISI ILYPLIMAAG PQIPSETLPY AALLIKEIVV GLVIGFVIYA ITAVLEGAGQ LIDMQMGFNM SGAIDPIFGV QSAMMGNFQM ILAIMLLLAT NSHHYLIAAM VKSYTYVPIN PGALPQGLNY YIFLIREIFT LSVQLALPVI GALVLTDIGV GLLMRTVPQM NIFTVIFPVK IIFGFTILFL GIGFFGETVN MLFERAMTWL LELYKGWQGT
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