Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4119 |
Symbol | |
ID | 7261139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4368521 |
End bp | 4369363 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643564036 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002460564 |
Protein GI | 219670129 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000767564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATACGG CAGAACTAGT GCTGCTTTAC CAGCTTCAAA GTATGAATCA GGCCTGGCAG GATACTTCAA GGAGTGAGTC CGGAAACAAG GATGGCTCCC AAGCTCTCCT CTTTGCCACC TTGCTCCAGT CCGCCCTTTC AGGAAATGAT GGCTCCAGCT CAGGATTAGC TTTGGAAGCT TTTGCCGGAC AAGAATTAGG GTCCGGTTCT GAGCAAGAGT CGCAGTCAAC TGAGAATTCA CAACTTCTTG CCGCAATGTT ACTGGGAAGT CTTTTTTCCG GAAAGGATTC TCTCTTATCT GAAAATCTTC TCTCATCCAT GAGCCTTACC GGAATGGGGC AAAATTCATG GACCTCTTTG ACCTCGGCAT ATAATCCTTA CTCCGGTATA GTAAACTCTC TCCAAGCAAA CTCCTTAAGT TCTCAGCGGA GTTCAGATTA CCGTTCCGAT CAGCCGGCTA TAGAACAGCT TATCGCGGAA GTAGGGCAGC GCCATGGGAT AGACACGAAT CTGATCCGGC AAGTGGTGAT GGCTGAATCC AGTTTTAACC CCCATGCGGT ATCGTCAGCG GGAGCTATGG GTCTGATGCA GTTGATGCCT GGTACGGCAA AGACTTATGG TGTGACCGAT CCTTTTGATC CGGCTCAGAA TCTTGATGGG GGAACCCGTT TTTTAAAGGA TTTGTTAGTG CGGTTTAAAG GAAATGTCGC GTTTGCCTTA GCGGGCTATA ATGCAGGCCC AGGGGCTGTA GATAAATACA ATGGGATTCC ACCTTACAAG GAAACGCAGA ATTACGTGAA AAAAATACTT TCTGCATTAG GAAAAGTAGA TACACAAGCA TAA
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Protein sequence | MNTAELVLLY QLQSMNQAWQ DTSRSESGNK DGSQALLFAT LLQSALSGND GSSSGLALEA FAGQELGSGS EQESQSTENS QLLAAMLLGS LFSGKDSLLS ENLLSSMSLT GMGQNSWTSL TSAYNPYSGI VNSLQANSLS SQRSSDYRSD QPAIEQLIAE VGQRHGIDTN LIRQVVMAES SFNPHAVSSA GAMGLMQLMP GTAKTYGVTD PFDPAQNLDG GTRFLKDLLV RFKGNVAFAL AGYNAGPGAV DKYNGIPPYK ETQNYVKKIL SALGKVDTQA
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