Gene Dhaf_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4114 
Symbol 
ID7261134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4363060 
End bp4364280 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content54% 
IMG OID643564031 
ProductROK family protein 
Protein accessionYP_002460559 
Protein GI219670124 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGACAG GAGTGCTGAT TTATAAAGAT GTTTTAAGCA GCTTGAGTCC GGAAGCTAAA 
AAGATATTGG GCCTGATCCT GCATAAGGGA GGGATGACTA AAAGTCAGCT GGCCAAAGTG
GCGGGATTAA AGCTTACCAC CCTGAACCGG ATGATGCTCC CTCTGGAGAA GGCGGATCTC
ATCCTCCCCA CGGAAACCGG TGAGTCCACC GGCGGTCGGA AGCCGGTCAT TTATGATGTA
AATCCCCGCC GCTATTATGT GATCGGGATT GATATTTCCC GCCTCTACTC CCAAGTTGTT
TTGACCAACC TGAAAATGGA GCTGATCGAG AAAGACCGCT TTGATATGGA CCGGAATTCT
TCGCCGCAAG CCACTCTGAA CCGGATTCTG GACTGGATAG GAAGGGTTAT GGAAAAGCGG
GGGCACGGAT ATGTGATCGG CGTTGGGATC GGTACGGTGG GGCCTTTGGA CCGTCAAAGC
GGCATCATCC TCAACCCGGA AAACTTTGAG GCCCAGGGTT GGGAAAATAT TCCCCTCAAA
GCTATCGTGG AAGAACGAAC GGGCTTGCCG GTCATCATCG ATAACGGTGC CAATGGGGCG
GTTCTGGCAG AAACCCGTTA CGGGAGCGGC AAAGGGATGA AAAGCGTGAT CTATTTGAAT
TGCGGGGTGG GAATCCGAAC CGGCGTCATC TCCTCAGGAA CTCTGGTCAG GACAATCAAT
GATGCAGATG ATACTTTCGC CCATATGGTG ATCGATGTCA ACGGTAAACC ATGTCATTGT
GGCAATCAGG GCTGCGTTGA GCGCTACTCC TCGATTTACG CTATTATGGA AGCCCTTGCT
GAGGAAATGC CCCAAGGGAA GGACCGCCGA AATCACAAGG CCGATCGCCC GGTCTCCTAT
CTGGAGCTCT GCCGGGAGGC TGAGGAGAAT GACACCATCG CCCGGCAAGT ACTGCAAAAT
GCCGCTGTAC GGATGGGCAC GGGGTTGGCT AATTTCATCC AGCTGCTCAA TCCGGGGCTT
GTGGTTCTGA GCGGACCGCT TATTTTGCAT TCTCAGCTCT TCTATGAGGT CTGTGTAGAG
GCCGCCAAGC GAAGAAGACC TTGGGATAAA GGGGGGCACC TGGTGTTCAG CCGGGGCGGA
GCCTTTGAAG AGAATGCCAT CTCCATCGGT GCGGCCGCTC TGGTGGTGGA GCATTATTTG
GAACCGGAGA CTCTTGGGTG A
 
Protein sequence
MRTGVLIYKD VLSSLSPEAK KILGLILHKG GMTKSQLAKV AGLKLTTLNR MMLPLEKADL 
ILPTETGEST GGRKPVIYDV NPRRYYVIGI DISRLYSQVV LTNLKMELIE KDRFDMDRNS
SPQATLNRIL DWIGRVMEKR GHGYVIGVGI GTVGPLDRQS GIILNPENFE AQGWENIPLK
AIVEERTGLP VIIDNGANGA VLAETRYGSG KGMKSVIYLN CGVGIRTGVI SSGTLVRTIN
DADDTFAHMV IDVNGKPCHC GNQGCVERYS SIYAIMEALA EEMPQGKDRR NHKADRPVSY
LELCREAEEN DTIARQVLQN AAVRMGTGLA NFIQLLNPGL VVLSGPLILH SQLFYEVCVE
AAKRRRPWDK GGHLVFSRGG AFEENAISIG AAALVVEHYL EPETLG