| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4065 |
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| Symbol | murD |
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| ID | 7261085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4312864 |
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| End bp | 4314228 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643563982 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002460510 |
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| Protein GI | 219670075 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA AGAAAAAAAA AGTATTGGTC GTCGGTGCTG GAAGAAGTGG CTTGGCGGCA
GTTAAAAGAC TGAAAGCCCT GGGCGCCCGC GTCATCTTAA CGGATCAAAA GGAGCCGGAT
CAACTCAGTG GTATCTTAGA ATTGGGCTTG CCGGATGGAC AACTTGTGTT GGGGCATATC
CCGCAATGGC ATGAGGTGGA AGCTGAAGTG ATCGTTCTTT CTCCCGGAGT ATCCCCCCAA
CTTCCCTTTA TTCAAGAGGG GATTGCTCAG GGGGCTTTGG TTTGGAGTGA GGTTGAGCTT
GCCTTGAGAG ATCATCCGGC CTTCAAGATT GGCGTGACAG GTACCAATGG GAAAACCACT
ACCACCACAT TGATTGGGGA ACTGGCCAGG CGGACCGGAA AATCAACTCT GGTCGCCGGC
AATATCGGCG TGGCCTTAAG CGATCAGGTG GAGAACCTGG ATGAGGAAGG GATTATCGTA
GCCGAGCTTT CCAGTTTTCA GTTGGAATTG GTGGACAGTC TCTGTATGAA TGTGGGGATT
CTCCTCAATG TGACCCCTGA TCATTTAGAT CGTCACGGGA CCCTGGAGAA TTATCTGGCA
GCCAAGGCCC GGATTTTTGA GAAGCAAAGG CCGTCGGATT GTGCCATTTT AAACTGGGAT
GATGCCAGGG TTCGTGAGTT GGCTCCTCAT CTCAAGGCCC GGGTGGTCTT CTTTAGCCCT
ACTTCTCTCT TGGCAGAGGG ATACGGAGTG CAAGGGGATG AGATTGTTCT CGCCAGGGAC
GGGAAGATCA CTCCCATCAT CAAGCGCAGG GAACTTCAGC TCAGGGGTAA TCATAATCTG
GAAAACATTA TGGCTTCCAT CGCGGCGGTG AGGGAGCTGG GACTTTCCTG GGAGGAGATC
GCTCAAGGCC TCCGGGAGTT TAAAGGGGTT GAACACCGTC AGGAAGTGGT AGGGACCTAT
GAGGGGATCC TTTTTATTAA TGATTCCAAA GGGACTAATC CTGATGCGGC AGAAAAAGCC
TTATATGCCT TTGAAGAGCC CATCGTTCTT ATTGCCGGGG GGAAAAACAA AGGCTTGGAT
TTCCATGATT TCATGAAAAC GGTTAAGGAA CAGGTGAAAA GCCTTGTCCT GGTCGGCTCG
GCGGCGGCTG AGATGGAGCA GGCGGCCAAA GATACAGGAA TTCGGCATTA CCTGCGGGCT
GAGACCTTTG CAGAGGCTGT GGAGCTGGCC ATTGCCGAAG CAGAGCCTGG AAATGTGGTT
TTGCTCTCAC CGGCTTGTAC AAGTTGGGAT ATGTTTAAGA GTTATGAAGA AAGAGGGGAA
TTCTTTAAGG AGTTAGTGCG TAGGCATTAT AGGGAACCCA TTTAA
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| Protein sequence | MNLKKKKVLV VGAGRSGLAA VKRLKALGAR VILTDQKEPD QLSGILELGL PDGQLVLGHI
PQWHEVEAEV IVLSPGVSPQ LPFIQEGIAQ GALVWSEVEL ALRDHPAFKI GVTGTNGKTT
TTTLIGELAR RTGKSTLVAG NIGVALSDQV ENLDEEGIIV AELSSFQLEL VDSLCMNVGI
LLNVTPDHLD RHGTLENYLA AKARIFEKQR PSDCAILNWD DARVRELAPH LKARVVFFSP
TSLLAEGYGV QGDEIVLARD GKITPIIKRR ELQLRGNHNL ENIMASIAAV RELGLSWEEI
AQGLREFKGV EHRQEVVGTY EGILFINDSK GTNPDAAEKA LYAFEEPIVL IAGGKNKGLD
FHDFMKTVKE QVKSLVLVGS AAAEMEQAAK DTGIRHYLRA ETFAEAVELA IAEAEPGNVV
LLSPACTSWD MFKSYEERGE FFKELVRRHY REPI
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