Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4054 |
Symbol | |
ID | 7261074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4301585 |
End bp | 4302334 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643563972 |
Product | sporulation sigma factor SigE |
Protein accession | YP_002460500 |
Protein GI | 219670065 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000091924 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGGA TAGTAGAGCA TATCAAACTG ATAGTGGAAC ATATCAAGTT ATGGGCCGTA AAAATCAAAT CAAAACTGAT AAGCAAGTTT ACCGACTGGC GGGAAATTTA TTATGTAGGG AGCAGTGAAG CTCTCCCTCC TCCCTTAAGC ACGGATGAGG AAGGAGAGCT GTTGGAACGC CTGGAGCGGG GGGATGTGAG TGTCCGGGAT GTTCTGATTG AACGAAATTT GCGGCTGGTG GTCTATATTG CCCGCAAGTT CGAAAATACG GGAGTCGGTA TCGAGGATCT TGTCTCCATT GGCACGATTG GGCTGATCAA GGCTGTCAAT ACCTTTGATC CTCAGAAAAA GATCAAACTG GCAACCTATG CTTCACGTTG TATTGAAAAT GAAATCCTGA TGCATTTGCG CCGCAACAAT AAAACGAGAA CCGAGGTATC CTTCGATGAG CCTTTAAATA TTGATTGGGA TGGTAATGAG CTCCTGCTTT CCGATGTCCT GGGCACGGAA AACGATATTA TTTCCCGTCC TTTGGAGGAA AAGGTGGATC GCCAGCTTTT GCATTTAGCG ATGGCCAGGC TGACGGATCG TGAAAAACTG ATTATGGAAT TGCGCTTTGG TTTGGATAAT GGAGAAGAAA AAACCCAGAA GGAAGTTGCC GATCGGCTGG GTATATCCCA ATCCTATATT TCGCGGCTGG AAAAGCGGAT TATCCGCCGT TTGCGGAAAG AATTTATCCG TTTGGAATAA
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Protein sequence | MRRIVEHIKL IVEHIKLWAV KIKSKLISKF TDWREIYYVG SSEALPPPLS TDEEGELLER LERGDVSVRD VLIERNLRLV VYIARKFENT GVGIEDLVSI GTIGLIKAVN TFDPQKKIKL ATYASRCIEN EILMHLRRNN KTRTEVSFDE PLNIDWDGNE LLLSDVLGTE NDIISRPLEE KVDRQLLHLA MARLTDREKL IMELRFGLDN GEEKTQKEVA DRLGISQSYI SRLEKRIIRR LRKEFIRLE
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