Gene Dhaf_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4040 
Symbol 
ID7261060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4288793 
End bp4289650 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID643563958 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002460486 
Protein GI219670051 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000197735 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTA CAGAAAGTCT GGCCAACCGG ATTGTGGATT TGATTTATAC CGAAAGTGGG 
TTTCATGGCA TTGTTTGTGA CGCTACGGGG ACCATTATCG CCGATTCGGC TAAACAGCGG
GTTGGCATTG CCCATGCGGG TGCACACCGC ATCATGACGA CCTCTATCCA AGACATTAAA
ATCACTGCGG AAGATGAAAT GAATTCTCAG GGAAAACAAC GGGAAGGCAT GAACATTGCC
ATTGTCCTCG AGGGGGAAAA GCTGGGGACC TTTGGCGTGG CCGGCCCTTT GGATAGCGTT
AGTCCTGTAG CGAAGGTCAC AGCGGCGATG ATTGCTTTTT TACTCCGGGA TGAGGAGCTG
AAAGAGGTTC TCAAGGCTCA TGTGGAGAGG ATGGGAGAGG CTCTGGAACA AGCGGCTGGG
GCTATCCAGG AAATGGCGGC TTCTTCGGAA GAGGTGGCGG GGGTGAGCCA GACTGTGGCT
ACGGTAGCCC AGAATGCCAA AGAGCATGTT AAGGCCACGG AAGGTGTCAC CGAATTCATT
CGCCGGGTGT CGAAGCAGAC CAATCTTTTA GGGCTTAATG CGGCCATTGA AGCGGCCCGT
GCCGGAGAAC AAGGAAAAGG ATTCTCGGTA GTGGCGGGAG AAGTGCGCAA GCTGGCCGAT
GAAAGCAACC GTTCAGCCAA TGAAATCAAT AATTTGCTGA GCACCTTTCA GGATACCATG
GAAGAGATCG CCAATGGGGT GTTTCAAAAC AATGTCATAG CTCAAGAACA AGCTAAGGCC
ACTCAGGAGA TTGCTCAGAT GGTGGAGGAG CTGCAGCAGG TCGGCACTGA ATTAAACGAG
CTGGCCCACA AGCTGTAA
 
Protein sequence
MRLTESLANR IVDLIYTESG FHGIVCDATG TIIADSAKQR VGIAHAGAHR IMTTSIQDIK 
ITAEDEMNSQ GKQREGMNIA IVLEGEKLGT FGVAGPLDSV SPVAKVTAAM IAFLLRDEEL
KEVLKAHVER MGEALEQAAG AIQEMAASSE EVAGVSQTVA TVAQNAKEHV KATEGVTEFI
RRVSKQTNLL GLNAAIEAAR AGEQGKGFSV VAGEVRKLAD ESNRSANEIN NLLSTFQDTM
EEIANGVFQN NVIAQEQAKA TQEIAQMVEE LQQVGTELNE LAHKL