Gene Dhaf_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4039 
Symbol 
ID7261059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4287258 
End bp4288355 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content51% 
IMG OID643563957 
Productglycine cleavage system T protein 
Protein accessionYP_002460485 
Protein GI219670050 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000142158 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGAAC TAAAAAGAAC ACCACTGTAT GAGCAGCACC GCCGGGCCGG TGCGAAGCTC 
ATTGATTTCG GCGGCTGGGA AATGCCGGTT CAATACGCCG GAGTCATTGA GGAGCACAAG 
GCCGTGCGCA GCAAAGCGGG GCTTTTTGAT GTCTCTCATA TGGGTGAGGT GGAGTTGAAG 
GGAAAGGATA GCCTTGCTTT TTTGCAGTAC CTATTGACCA ATGATGTGTC GCGAATTCAG 
GATAACCAGA TTCAGTATTC CCCCATGTGC ACCTCTGCTG GGGGTGTGGT GGATGATCTG 
CTGGTCTATC GTTATAGCCG GGAGCATTTT TTGCTGGTGG TCAATGCCTC CAATACGGAT 
AAGGATTTTG CCTGGATGCA GGCTCAAGCT GAGGGCTTCG AAATAAGTCT GGAAAATCGC 
TCCGGGGACT TTGCCCAATT GGCTTTGCAA GGCCCTTGGG CGGAGAAAAT CCTGCAAAAG 
CTGACAAGTA TGGATTTAGC ACAGATCAAC TACTATTGGT TTAAGCATGG GGAAGTGGAC 
GGAGTCCTTT GCCTGATTTC CAGGACAGGT TATACCGGGG AAGACGGCTT TGAAATTTAC 
CTGCCTCCCG AGCATGCTCC CCGGATGTGG GAAAGAATTC TCGAGGTTGG AGGGTCGGAG 
GGAGTTCAGC CCATTGGTCT GGGCGCCCGG GATACTCTCC GTTTTGAAGC CAGGCTGCCT 
TTATACGGCA ATGAACTGGG GCCGGATATC ACACCTTTGG AGGCCGGGCT AGGGTTTTTT 
GTCAAGCTGG AGAAGGATAA CTTTATCGGT AAAGAGGCGT TATCAGCCCA GAAGGAAAAG 
GGAGTGCCGA GAAAGTTGGT AGGCCTGGAA ATGATCGAAC GGGGCATAGC CCGCTCCCAT 
TATCCCCTTC AGAAAGAGGG TAAAGAAATC GGCTTTATTA CTTCAGGTTC TTTTTCACCT 
ACTTTAAACA AAAACATTGC CCTTGGCTTG ATTCCCCCGG AGTATGCTCA AATAGGGGAA 
ACCTTGGATG TGATCATTCG TGGGAAAGCC GTTAAAGCCC GGATTATTCC TTCACTGTTC 
TACAAACGGC AGGGGTAA
 
Protein sequence
MTELKRTPLY EQHRRAGAKL IDFGGWEMPV QYAGVIEEHK AVRSKAGLFD VSHMGEVELK 
GKDSLAFLQY LLTNDVSRIQ DNQIQYSPMC TSAGGVVDDL LVYRYSREHF LLVVNASNTD 
KDFAWMQAQA EGFEISLENR SGDFAQLALQ GPWAEKILQK LTSMDLAQIN YYWFKHGEVD 
GVLCLISRTG YTGEDGFEIY LPPEHAPRMW ERILEVGGSE GVQPIGLGAR DTLRFEARLP 
LYGNELGPDI TPLEAGLGFF VKLEKDNFIG KEALSAQKEK GVPRKLVGLE MIERGIARSH 
YPLQKEGKEI GFITSGSFSP TLNKNIALGL IPPEYAQIGE TLDVIIRGKA VKARIIPSLF 
YKRQG