| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4036 |
|---|
| Symbol | |
|---|
| ID | 7261056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4283938 |
|---|
| End bp | 4285401 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643563954 |
|---|
| Product | glycine dehydrogenase subunit 2 |
|---|
| Protein accession | YP_002460482 |
|---|
| Protein GI | 219670047 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCT TGGAACCGCT GATTTTTGAA CTAAGCAGGG AAGGGAGAAC AGGGGTAAGC
CTGCCCTCCT GCGATGTGCC GGAAATTCCT CTCGAGGATC TGATTCCTCA AGAGTTTTTA
AGAGATAAGG AACCTGAACT GCCGGAAGTT TCCGAGGTGG ATGTGGTCCG TCACTTCACC
CGGCTCTCTT CCTTCAATCA TGGAGTGGAT ACGGGTTTCT ATCCTTTAGG CTCCTGCACC
ATGAAATATA ACCCTAAGGT TAATGAGAAA CTGGCCCGCT TGCCGGGCTT CAGTCAGATT
CATCCCTATC AGCCGGAAGA ATTAACTCAG GGTGCCCTGG GTTTGATGGT TGAACTCCAG
GAGGAACTTG CCGAGATTAC CGGCATGGAT GCCTTTACAT TACAGCCCGC TGCCGGTGCC
CATGGGGAGA TGACCGGGAT TCTGATCATC AAGGCCTACC ATGACCACCG TCAGGATGTT
AAGCGCAGGA AGGTTATTGT TCCCGATTCC GCTCATGGGA CCAACCCGGC CACAGGGGCC
ATGGCCGGCT ATGACATTGT TCAGGTGCCC AGCAATGAGC GGGGAGGGGT GGACATCGAG
GCCTTGCGCC AGGTGGCCAA TGATGAAGTG GCTGCCTTGA TGCTGACCAA CCCTAACACT
CTGGGATTAT TTGATGAAAA CATCCTGGAA ATCGCTGAAA TCATCCACTC TGTGGGGGGC
CTGATCTATT ATGATGGAGC CAACGCCAAT GCCATTATGG GAATAGCCCG CCCCGGGGAT
ATGGGCTTTG ATGTGGTGCA TCTTAATCTG CACAAGACCT TCTCCACTCC CCATGGCGGC
GGGGGCCCAG GGTCAGGCCC GGTAGGGGTG AAGGAATTCC TCGCTCCCTA TCTGCCTAAA
CCCGTGGCAA TCCGGACCCC TGAGGGCCGT TACTCATGGG ATGAGGACCG TCCGCTCTCC
ATTGGCCGGG TAAGAGCTTT TCAGGCTAAT TTCGGAGTCC TGGTAAAGGC CTATGCCTAT
ATCCGGGCCT TAGGCGGAGA AGGGCTGAAA GCCGCCTCTC AAAATGCCGT CCTCAACGCC
AACTTCCTGA TGAGCATCCT GAAAGAGCAT TATCACCTGC CCTATGACCG GGTGTGCATG
CATGAGTTTA TCATCACTCC CAAAAATCTC AAGAACTATG GCATCCATAC CTTGGATATT
GCCAAGCGGC TTCTGGATTA TGGCTACCAT CCCCCGACGA TCTACTTCCC CCTCATTGTG
GAAGAGGCCA TGATGATCGA GCCTACAGAG ACTGAGAGCC TGGAAACTCT GGAGCAATTT
GCCCGAGTGA TGATCCAAAT CGCTGAAGAA GTGAAGCAGG ACGCGGAAAT GGTGAAAAAT
GCCCCCCATG ATACCCTGGT AACCCGTTTG GATGAAACAG GGGCTGCCCG CAAACCCGAT
CTGCGCTGGC GGAAACCGCA GTAA
|
|---|
| Protein sequence | MRALEPLIFE LSREGRTGVS LPSCDVPEIP LEDLIPQEFL RDKEPELPEV SEVDVVRHFT
RLSSFNHGVD TGFYPLGSCT MKYNPKVNEK LARLPGFSQI HPYQPEELTQ GALGLMVELQ
EELAEITGMD AFTLQPAAGA HGEMTGILII KAYHDHRQDV KRRKVIVPDS AHGTNPATGA
MAGYDIVQVP SNERGGVDIE ALRQVANDEV AALMLTNPNT LGLFDENILE IAEIIHSVGG
LIYYDGANAN AIMGIARPGD MGFDVVHLNL HKTFSTPHGG GGPGSGPVGV KEFLAPYLPK
PVAIRTPEGR YSWDEDRPLS IGRVRAFQAN FGVLVKAYAY IRALGGEGLK AASQNAVLNA
NFLMSILKEH YHLPYDRVCM HEFIITPKNL KNYGIHTLDI AKRLLDYGYH PPTIYFPLIV
EEAMMIEPTE TESLETLEQF ARVMIQIAEE VKQDAEMVKN APHDTLVTRL DETGAARKPD
LRWRKPQ
|
|---|
| |