Gene Dhaf_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4028 
Symbol 
ID7261048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4277526 
End bp4278449 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content51% 
IMG OID643563946 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_002460474 
Protein GI219670039 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.140767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTG ACTTCACTTC CCGACCGCCC CAAAAACACC ATTGGAAGAT ATGGTGGGAA 
TTAATTCGTC CCCATACCTT GACGGCCGCC ACAGTTCCGG TTCTGCTGGG ATCGGTTCTG 
GCCTTGCTGG AGGGGAAGAC CCATCTGCTG CTTTTTGCCG CTATGATGAT CGCCAGCCTG 
CTCATTCAGG CGGCAACCAA TCTTTTTAAT GAATACTACG ATTATAAGCG GGGATTGGAT 
ACGGAGAAAT CGGTGGGCAT TGGCGGCGGC ATTGTGCGTC ATGGTATGGC TCCCCGCCTG 
ATTATGACCC TTGCTCTGAG TATGTATGCG ATCTCGGTAC TGCTGGGCGT CTATATCTGT 
GCTTCTTCCT CCTGGTGGCT GGCAGCGGTA GGGTCCCTGT GCATGCTGAT GGGCTATCTT 
TATACCGGCG GTCCTTATCC TATTTCCTAT ACTCCCTTGG GAGAGCTGTT TTCCGGTTTG 
TTTATGGGCT TCCTGATCAT CCTGATCGCC TTTTTCATTC AGACCGGTTA TGTCTCAACT 
ACTGCTGTTT TAGTGGCGGT TCCCAGCGGT ATTTTAGTAG GGCTGATCAA TCTAAGCAAT 
AATTTGCGGG ACCGGGATGG GGATAAGGCC AACGGACGTA AAACCATTCC TGTTTTATTG 
GGACCGGAAA AGACCATCGT ATTTATGGGG ATGATGTTTG CCGTTGCTTA TCTCTGGATC 
GTGGGGCTGG TGATGGCCCG GCTTGTTACC CCCTGGGCTC TTTTGGCCTT GCTGAGCATA 
CCCAAAGCGA GGCAAGCGAC AAAAGGCTTT GTAGGGAAGG TAGAACCCAT TACCATGATG 
CCGGCTATGA AAGCGACCGG ACAGACCAAT ACCTTTTTTG GTTTGCTGCT GGCTCTGGGG 
CTGTTGGTGG GGTATTTTCT CTAA
 
Protein sequence
MSSDFTSRPP QKHHWKIWWE LIRPHTLTAA TVPVLLGSVL ALLEGKTHLL LFAAMMIASL 
LIQAATNLFN EYYDYKRGLD TEKSVGIGGG IVRHGMAPRL IMTLALSMYA ISVLLGVYIC 
ASSSWWLAAV GSLCMLMGYL YTGGPYPISY TPLGELFSGL FMGFLIILIA FFIQTGYVST 
TAVLVAVPSG ILVGLINLSN NLRDRDGDKA NGRKTIPVLL GPEKTIVFMG MMFAVAYLWI 
VGLVMARLVT PWALLALLSI PKARQATKGF VGKVEPITMM PAMKATGQTN TFFGLLLALG 
LLVGYFL