| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4016 |
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| Symbol | |
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| ID | 7261036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4263969 |
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| End bp | 4267166 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643563934 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002460462 |
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| Protein GI | 219670027 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAG AGAACGGAAA CAGGAACACG AAGAAATGGA ATAAAGTGCT GGTGATCGGT
TCCGGTCCTA TCGTCATCGG GCAAGCGGCG GAATTCGATT ATGCGGGAAC CCAGGCTTGC
CGGGCCTTGC AGGAAGAAGG GGTGGAGGTG GTTCTGGTCA ATTCCAACCC GGCCACCATC
ATGACGGACC AGGAAGTGGC GGATCGGATC TATATCGAAC CCCTGACGGT GGAATTTCTG
GAGAGAATTA TTGAAAGAGA ACGGCCTGAC GGCATCATCG CCACCATGGG GGGGCAAACC
GGCCTGAACC TGGCTTTTCA GCTGGCGGAA AAGGGAATTC TCCAGCGCTG CGGCGTTCAG
CTGATGGGAA CTTCGCTGGA TAGCATCACC AAGGCAGAGG ATCGGGAACA TTTCCGGAGC
CTGATGAGAG AGCTTGGAGA GCCGGTTCCT CCCAGCGTTA TCGTATCGGA TCTTGAAGAG
GCCCTCAGTT TTGGCGAGGA GATCGGATAC CCCGTGATTG TCCGCCCTGC CTATACCTTG
GGAGGCACAG GAGGGGGCAT CGCTCATAAC CGGGAGCAGC TCAAGGAAAT CGCCAAAAGC
GGCTTGCAGG CCAGCCTTAT CGATCAGATT CTGGTGGAAA AAAGCGTGGC GGGCTGGAAG
GAAATCGAAT ATGAAGTGTT GAGAGATAGT CAGGGGAATT GCATCACCAT CTGCAACATG
GAGAATATGG ACCCGGTAGG GGTGCATACG GGGGACAGTA TGGTTGTGGC TCCTTGCCAG
ACCCTGACGG ATCGGGAAGT TCAAGCCCTG CGCACCTCCT CCCGCAAAAT CGTGGCGGCT
TTAGGTATTG AAGGAGGATG CAATGTCCAA TATGCCTTGC ATCCGGAACG GCTGGAGTAT
GTGGTCATTG AAGTGAATCC TCGGCTGAGC CGCTCCAGCG CCCTGGCTTC CAAAGCTACG
GGCTACCCCA TTGCCAAAGT GGCCGCCAAG ATCGCTTTAG GATACACTCT TCCGGAGCTG
ACCAATGCCG TCACCGGCAA AACCAGCGCC TGTTTTGAAC CGGCTCTGGA CTATGTGGTG
GTTAAAATCC CCCGCTGGCC TTTTGATAAA TTCTCCGATG CGGACCGCCG TCTGGGAACC
CAGATGAAGG CGACGGGGGA AGTCATGGGC CTGGGCCGGA ATCTGGAGAC CGCTCTGCAA
AAGGCTGTCC GTTCTTTGGA AATCAAAGCC TTTGGTCTGC TGCTCCCCGA ATTCCAGGAG
CTTACCGATG AAGAGATTCT GGAGCGCTGC CAAAAGCCTG ATGATCAATT GCTGTTTATT
CTCGCCGAGG GGTTGCGAAG AGGGTTGAGC CTTGAACAGA TTCAGAAGGC CAGCAGCTGG
AACCCTTATT TCCTTACAGC CATTGAACGG ATTGTCAGGA TGAGTGAAAC CCTGCAATTC
TCTCCCTGGA ATGGGGAGCT TTTGTTAAAA GCCAAAAGAA TGGGCTTTGC AGATCGGGAG
CTGGCCCGCC TCTGGCAGAC CACGGAAAAA GAAATATATG CTTACCGGCA GGAAAAAGGT
TTGCAGCCGG TTTTCAAGAT GGTGGATACT TGTGCCGGCG AGTTTGAGGC CTTGACCCCT
TATTTCTACT CCAGCTATGA CCAGGAGGAT GAAGGAATAC CCACCCAGAG GCGCAAGGTG
GTAGTCCTGG GCTCCGGTCC TATCCGGATT GGCCAAGGGA TTGAATTCGA CTATTGCTCC
GTTCACTCCG TTCTGGCTTT GAAAAAAGCC GGTGTGGAAA CCATCATTAT CAATAATAAT
CCGGAGACCG TCTCCACGGA TTTTGACACC GCAGACCGTC TCTATTTTGA GCCTTTAACC
TTGGAGGATG TCTCAGCTGT CCTGGAGCGG GAGCAGCCGG AGGGTGTGAT TGTCCAGTTC
GGCGGTCAAA CGGCCATCGG TCTGGCCAAG CCCTTAGCTG AAAGAGGATA TAACATCCTG
GGCACCGGCA TTGAGGATAT CGACCGGGCT GAGGAACGGG GGCAATTTGA TGAAGTGCTC
CATACCATCG GCGCCAAGCG GCCTAAGGGA GGCCAGGCCT CTTCCCTGGC GGAAGCGGTT
GAAGTGGCAG CCCGCATCGG CTATCCTCTG ATGATCCGTC CTTCCTTTGT CTTGGGAGGC
CGGGCCATGG AGATTGTTTA CTCAGCCTCA GAACTGGAAA ACGTGGTGAA CCGGGCCATG
GCCGATTTCC CGGGCCAGGA GCTATGGATG GATCAGTACC TGGTGGGCAA GGAGGTGGAG
GTGGATGCCA TCTCCGACGG CAAGAATGTC AGCCTGCCCG GAATTATGGA GCATCTGGAG
CGGGCCGGAG TTCACTCTGG AGACTCCATC GCCGTCTACC CTCCCCAGAC TTTGTCCGAA
CCTTTAATCC AGCGGATTAC CCTGCTGACT ACGGAAATCG CCCGGGCTTT AAATGTGATT
GGCCTGCTTA ACATTCAATA CGTCATCTTT CAGGATGAAG TGTATGTGAT TGAGGTTAAC
CCCCGCTCCA GCCGTACGGT TCCCTTTATC AGCAAAGTGA CCGGACTGTC TATCGTGGAT
TATGCCACCG AGGTCATTCT CGGGAAGACT TTGACGGAAT TGGAACTGCC CTTAGGCTTG
TGGCCTCTCC CGGAACGGGT GGCTGTAAAG GTCCCTGTGT TTTCCTTTTC CAAACTCCAT
CGGGTGGAAC CCTCCCTGGG TCCGGAGATG AAGTCCACCG GAGAAGTGAT GGGAGTGGAC
CGGACTTATG AAAAAGCTCT CTACAAAGCC CTCCTGGCGG GAGGATTCAA TATGTCCGCC
CACGGCAGCC TCTTGGTGAC CTTAGCGGAT CGGGATAAGG CAGAGGGGAT ACCCTTGGTC
AAGAAATTTG CCGACCTGGG CTTCCGCATC TTAGCCACGG AAGGAACGGC TAAAACCCTC
CGGGAAGAAG GAATTCAGGT TGCGCCGGTG GCCAAGCTCC ATCAGGGGTC CACGGAAATT
ACCGATGCTA TCCGGCAGGG TGTGATTCAA TGTGTCCTCA ACACTACCAC TCACAACAAA
AAGCAGGAAA GCGACGGCTT CGCCATTCGC CGCACAGCGG TAGAGCAAGG GATTCCCTGC
TTCACCAGCC TGGACACCGC TTCCGCCTGG GTTCATGTGC TGATGTCGTT TTTGCCCAGC
CTGATGTCTC TTAAGTAA
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| Protein sequence | MNAENGNRNT KKWNKVLVIG SGPIVIGQAA EFDYAGTQAC RALQEEGVEV VLVNSNPATI
MTDQEVADRI YIEPLTVEFL ERIIERERPD GIIATMGGQT GLNLAFQLAE KGILQRCGVQ
LMGTSLDSIT KAEDREHFRS LMRELGEPVP PSVIVSDLEE ALSFGEEIGY PVIVRPAYTL
GGTGGGIAHN REQLKEIAKS GLQASLIDQI LVEKSVAGWK EIEYEVLRDS QGNCITICNM
ENMDPVGVHT GDSMVVAPCQ TLTDREVQAL RTSSRKIVAA LGIEGGCNVQ YALHPERLEY
VVIEVNPRLS RSSALASKAT GYPIAKVAAK IALGYTLPEL TNAVTGKTSA CFEPALDYVV
VKIPRWPFDK FSDADRRLGT QMKATGEVMG LGRNLETALQ KAVRSLEIKA FGLLLPEFQE
LTDEEILERC QKPDDQLLFI LAEGLRRGLS LEQIQKASSW NPYFLTAIER IVRMSETLQF
SPWNGELLLK AKRMGFADRE LARLWQTTEK EIYAYRQEKG LQPVFKMVDT CAGEFEALTP
YFYSSYDQED EGIPTQRRKV VVLGSGPIRI GQGIEFDYCS VHSVLALKKA GVETIIINNN
PETVSTDFDT ADRLYFEPLT LEDVSAVLER EQPEGVIVQF GGQTAIGLAK PLAERGYNIL
GTGIEDIDRA EERGQFDEVL HTIGAKRPKG GQASSLAEAV EVAARIGYPL MIRPSFVLGG
RAMEIVYSAS ELENVVNRAM ADFPGQELWM DQYLVGKEVE VDAISDGKNV SLPGIMEHLE
RAGVHSGDSI AVYPPQTLSE PLIQRITLLT TEIARALNVI GLLNIQYVIF QDEVYVIEVN
PRSSRTVPFI SKVTGLSIVD YATEVILGKT LTELELPLGL WPLPERVAVK VPVFSFSKLH
RVEPSLGPEM KSTGEVMGVD RTYEKALYKA LLAGGFNMSA HGSLLVTLAD RDKAEGIPLV
KKFADLGFRI LATEGTAKTL REEGIQVAPV AKLHQGSTEI TDAIRQGVIQ CVLNTTTHNK
KQESDGFAIR RTAVEQGIPC FTSLDTASAW VHVLMSFLPS LMSLK
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