Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4009 |
Symbol | |
ID | 7261029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4256074 |
End bp | 4258107 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643563927 |
Product | putative ATP-dependent helicase |
Protein accession | YP_002460455 |
Protein GI | 219670020 |
COG category | [R] General function prediction only |
COG ID | [COG3972] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00213516 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA ATTACTTTTA TTCACAGGTA GAAATAAATG AAGAGAATGC TTTATTAATT GAAGCACTTA GAACATTCGC CAATGATAAC TCCATTCAAA CGTATGCTAT TCTAGAACCA CTCGGCGAGG AAAAGTATAA TTATGATTAT AAGAATGTAG TTAATGTTCT TATTCCCGGC TATAAAATAC TTATTGTCAA TGTTGGTAAA AGTAACGACG AAAAATTCGA ATACTTTTGC GAAGATTTTA TTGAAGATTT AAGTCACCTT TCTGACAAGT TTACATATAA GGACAAAATT GGTAGGCCGA GGGATTGGAA GCGTAACCAA ATAGAGTTAA TAAACTATGA AAACTTCGAT GCCGAGGATT TCATAGAAAA GATTAATATT TATAAACTAT CAAATCCAGT TCAAAAGAGA ATTTCTGAAT TATTAATTTC TTTATTAATT GGAAGTATTA ACCCAATTGT AAATATCGGA ATAGATGAAC CTGAAAATAT TTTGGATAAA GTTAAACAAA AGATAGTTTT ATTTGATAGT GATCAAACAC GTTTCATCTT TGAAAAAGTT AATGAACGAA GGATTGTTAT TCAAGGATTA GCTGGTACGG GTAAAACAGA GTTGTTATTG CATAAACTAA AAGAATTATA TGTTAGGGAA AGCAAGTCAA AAATTTCATT TACTTGTCAT AGTAAAACTT TATCTAGCAA CCTAAGAATG CGAGTACCTC AATTCTTCAC ATTTATGAGG GTAGAGGAAC AAATTCAATG GAATGAGAGA TTATGGGTTC ACGGAAGTTG GGGATCTCAA AACTATCCCC ATTCTGGGCT TTATGCGCTT ATCTGTAATA GATATGGTAT ACCATTTCAA CGTTATTCTA GAGGAAAGAC ATTTGCCGGA ATTTGCGCAG ATGCAGTAAA ATTCTTGAAG CAAAGAAAAG TAAATGGAGA TCTCGAACCG TATTTTGATT ACATACTAAT TGATGAAAGC CAAGACTTTA CTGAAGAGTT TTTTGAATTG TGCGAAATGG TAACAAAAAA GGCTGTTTAT ATAGCTGGGG ATATATTTCA AAATATATTT GATAATGATT ATTCAAAGGT GGATCCTGAT TTTCTTCTGA ACAAATGCTA TAGAACTGAT CCTAGAACAT TGATGTTCTC ACATGCAATA GGGTTAGCTC TATTTGAAAG GCCAGTAGTT AATTGGTTAA GTGATAGAGA GTGGGAGGCA TGTGGATATC AGATAAGAAA GAACAATGAT AATTATAGAT TAACTCGAGA AAAAATAAGA CGATTTGAGG ATATAGAAGA TATGCAAGAA ATAAAGCCTG TTGAACTATA TTGTGTAGAA TATGACAATA TCTTAAATAA AATTATAAGT TTAATAGGTG AGATTAAAGC AAAACATTCT ACAGTTAAGC CTGATGATAT TGCAATTGTT TTTGTCGATG ATAGTAATAG CATTTACAGA ATGATTGATG TTTTGGGCGT ATTAATTAGA AATGAATTTA ACTGGGAGAT AAATAGAGGT TATGACAATA AAGGACAGAT TGAGGATACC TTATTTATAA GTAATAGAAA TAATATTAAA GGATTAGAAT TCCCTTTCTT AATATGTGTT GTAACTAATG AGATTGAAAA AAATATTAAG TCTAGAAATA CTCTTTATAT GACTTTAACC AGGTCATTTA TCTCATCTTA TTTAGTTATG TCTACTTATA ATTCTGATTT GTTCGAAATT TGGAATCCAC AATTAGAAGG GATTATTAAA GATAATAGTT TATCTATAGT TAGACCTGAA CCTGAAGATA TAATGTCTAA GGAACAATTA CAAATTAATG ATCCAACATA TAAAACTTAT CAAGAAATTG TGGAAGAACT GTTCTTAGAG TTTAAAATCC CTATTAAAAA GAGAGAGAAA ATGCTAAAGA TTTTAGATGC ATATGCAACA GATGATTCTG AAATTTTAGA AGAAGGATTA ATAAGAATGA TTATAGAGAA GAACTTGGAG CTTATAAATG GAAAAGATAA TTGA
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Protein sequence | MSKNYFYSQV EINEENALLI EALRTFANDN SIQTYAILEP LGEEKYNYDY KNVVNVLIPG YKILIVNVGK SNDEKFEYFC EDFIEDLSHL SDKFTYKDKI GRPRDWKRNQ IELINYENFD AEDFIEKINI YKLSNPVQKR ISELLISLLI GSINPIVNIG IDEPENILDK VKQKIVLFDS DQTRFIFEKV NERRIVIQGL AGTGKTELLL HKLKELYVRE SKSKISFTCH SKTLSSNLRM RVPQFFTFMR VEEQIQWNER LWVHGSWGSQ NYPHSGLYAL ICNRYGIPFQ RYSRGKTFAG ICADAVKFLK QRKVNGDLEP YFDYILIDES QDFTEEFFEL CEMVTKKAVY IAGDIFQNIF DNDYSKVDPD FLLNKCYRTD PRTLMFSHAI GLALFERPVV NWLSDREWEA CGYQIRKNND NYRLTREKIR RFEDIEDMQE IKPVELYCVE YDNILNKIIS LIGEIKAKHS TVKPDDIAIV FVDDSNSIYR MIDVLGVLIR NEFNWEINRG YDNKGQIEDT LFISNRNNIK GLEFPFLICV VTNEIEKNIK SRNTLYMTLT RSFISSYLVM STYNSDLFEI WNPQLEGIIK DNSLSIVRPE PEDIMSKEQL QINDPTYKTY QEIVEELFLE FKIPIKKREK MLKILDAYAT DDSEILEEGL IRMIIEKNLE LINGKDN
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