Gene Dhaf_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3999 
Symbol 
ID7261019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4249774 
End bp4250730 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content38% 
IMG OID643563917 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_002460445 
Protein GI219670010 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAG AAGGTATTGG AAGAATCTGT AACTTGGGAA CGGGTACAGT TGGTCCTGGT 
ATAACCCTAA CATTCGCTCT AGCTGGATAT GAAGTTAATA TGTATGGCCG CTCGAATGAT
AGTATAAAGC GTGGTATGAA TGCAATTACG GATATGCTTA AAAAATTTCG GGAACATGGT
TTAGTTAAAG ACTCAGATAT TCCGGAAATC ATTGGACGAA TAAAAGGCGT TACAACATTA
GAAGAAGCAG CTGATGGTGT TGACTTCGTT ATCGAATCAA TTGTCGAAAA CCTTTCAGCT
AAGCAGGAAA TATTTGCTAA AATGGAGAGG TTATGTTTAG TTAATACTAT CTTTGCTTCA
AGTACCTCGG GTCTAACCAC ATCGGCAATT GCCGAAAGCC TGGAATATAA AGAACGTTTT
ATCGTTGCCC ATTTTTGGAA TCCACCGCAT CTCATACCAT TAGTAGAAAT TGTTCCTGGA
CAATACACTT CCCAGAACAC CACTAATATT ACGTCAAAAT TATTACTTAA GATTGGCAAA
AAACCAGTAA TCTTAAAGAA GGAAGCTTTA GGTTTTATCG GTAATCGTCT ACAGTTTGCT
ATGCTTCGAG AGGCACTTTC TCTAATAGAT TCAGGGGTTG CCACGAAAGA AGCAATCGAT
ACAACGATTA AGTATGCTCT AGGTCGTCGC TTATCTACAA CTGGTCCACT TGAGAGCGCC
GATTTAAGTG GCTTAGATAT TATTTATGAC ATTTCATCTT ATCTATTCAA AGATCTTTGC
AACGATACAA GTGTTTCACA TACATTGACA GCACCCATTG ATGAAGGTAG GCTTGGTACA
AAAACAGGCT CAGGATTTTA CGAATGGACG CCAAATTCAT TGTCTAAAAT TAGCAAGGTT
CGGGAAGATA ACCTAATTGA ATGGTTAAAG AAAGATAGGA ACGGCTATCT AGAATAG
 
Protein sequence
MNVEGIGRIC NLGTGTVGPG ITLTFALAGY EVNMYGRSND SIKRGMNAIT DMLKKFREHG 
LVKDSDIPEI IGRIKGVTTL EEAADGVDFV IESIVENLSA KQEIFAKMER LCLVNTIFAS
STSGLTTSAI AESLEYKERF IVAHFWNPPH LIPLVEIVPG QYTSQNTTNI TSKLLLKIGK
KPVILKKEAL GFIGNRLQFA MLREALSLID SGVATKEAID TTIKYALGRR LSTTGPLESA
DLSGLDIIYD ISSYLFKDLC NDTSVSHTLT APIDEGRLGT KTGSGFYEWT PNSLSKISKV
REDNLIEWLK KDRNGYLE