Gene Dhaf_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3988 
Symbol 
ID7261008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4241237 
End bp4241833 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content38% 
IMG OID643563909 
ProductVanZ family protein 
Protein accessionYP_002460437 
Protein GI219670002 
COG category[V] Defense mechanisms 
COG ID[COG4767] Glycopeptide antibiotics resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.425328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGG TAATTGTGTT TGGAGTTCTA TTTGGAGGAG TTCCGTGGGT TGTGCTTCGT 
GGCATTTTTT TGTTATGGAG CAAGAACTAT AAAAATATAT CCATCAGAAG AGAGTTACTT 
GTGATGGCCT TTGTTATCTA CTACCTTGCA GTAATCAGGG TGACGATATT TTCGCTTCAT 
CCGAGTTCAA GTTACGGACA AGGTGGAACT CCCTCTGTGA ACATCATCCC ATTTACAGAA 
ATGTTCAGAG GATTTCATCC GAACCATTTT ACGTTTGGGT ATATGATAAG GCATCTGGAG 
TCGAATCTTA TTGGAAATAT CCTGTTGCTG CTCCCCTTAG GTTTCTTCTT ACCAACGCTT 
TGGAGTAGGT TTAGGTCATT TAAAAGAACC GTGTTAATCG GTATTCTTAG CTCATTGTCA 
ATAGAAACTG TACAATACAT ATTGGCTTAT CTTGGATTAA GCAGCGGGAG GGCATCAGAC 
ATCGATGATG TGATACTTAA TTCTATAGGA GTAATAATTG GATACATGGT ATTCCAAGTA 
ATTTACTATG GAATAAGGTG TTTCCGTAGA TACAGTACAT TTACTAAAGT GGATTAA
 
Protein sequence
MFEVIVFGVL FGGVPWVVLR GIFLLWSKNY KNISIRRELL VMAFVIYYLA VIRVTIFSLH 
PSSSYGQGGT PSVNIIPFTE MFRGFHPNHF TFGYMIRHLE SNLIGNILLL LPLGFFLPTL 
WSRFRSFKRT VLIGILSSLS IETVQYILAY LGLSSGRASD IDDVILNSIG VIIGYMVFQV 
IYYGIRCFRR YSTFTKVD