Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3980 |
Symbol | |
ID | 7261000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 4232092 |
End bp | 4234071 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643563901 |
Product | histidine kinase |
Protein accession | YP_002460429 |
Protein GI | 219669994 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR03669] urea ABC transporter, substrate-binding protein, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAACC GAAGGCGGGA GAATCAGGGT GTTTCAACAG ATCCCGACAA AACGGCTCTT ATGCAGGCTT ATGAAGACCT GAATTCCTTC ATCTATACCA TATCCCACGA ATTGAAAACC CCGGCGCGGG AGATCAGCCT TTATGCGGAA TTCATCGAGG AAGACAATAA GGCGAATCTT CTGCCCCAGT CTGTGGAGGA CATCCGTTCC ATCCGCAGGA CCTGCGACAG CATGACGATG ATGGTCCAGC GGCTTATGGA ATATTCCAAG GCGGGTTTTA AGATCATTGA ACAACAGCAA ATCAGCGCAG CGCTTCTTGT GCGCCAGTGC TTCGATGAGA TCATGCGTTC CGTCCCCGGG CGCAAAGTCG AGCTGACGGT GGGGGATCTT CCCGAAATTA TGGGAGACCT GTTTCTGATT AAGCTTATGA TGACCAACAT ACTTTCCAAC AGCATCAAGT TCACCCGCGA AAAGGCGAAC GCCAGAATCA ATGTCACTGC CAAGATCCTG GAAGACACGC TGGAATTTCA TTTCCGGGAT AACGGCATAG GATTTGATAT GGCCTATGCG GGACGGATCT TCGAGGCCTT CCAGCGCCTG CAGGATGAGG ACGCCTACGA AGGGAGCGGC ATCGGCTTGG CAACGGTCAA GAAAATCGCC CAGCGCTTCG GCGGCGATGC CTCGATCATC GGCTGGCCCG GAAAGGGGTG TGAAGTCTGC GTCAGCTTTC CCGGAAGTCT CTTAAAAACA CCCAGGGATA ACAGGGAATC CGAGCGGGAC GTTATTAAGG TCGGCATCAT CGGAGATTTT ACCGGCATAT GCTCGGAACT GGAACGGGGC AAAGTTGCGG CTTACAAGCT TGCCGCCGAT GAAATAAACC GGATGGGCGG AATAAACGAA AAAAAGGTGG AGCTGCTGTT CCGCGACGAC CGGTCCCTTT CCGAGCTGAC CCGGGAAGCC GTCAAGGAGC TGACGGAAGA GGAGCGGGTG GACGTCCTGA TGGGCTCGAC CCTATCCCCT TCCCGGGAGA TCATGCAGCA TTACGCCGAT CAGACGAAAA CCCTATATCT CGATACCCAG CAAACGGAAG GAGGAGTCTC CAGTCATTAT ACTTTCTGCC TTTCGGCGAT GCCTGAACAA CAGATGACCC AGATGCTGGC CTATCTCCTG CAAAAATACG GGCGGAAATG CTACGTGGTG GCTGCCGACT ACAATTATGG CATCCTCTCC GCGGAATGGG TAAAGTACCT TGTGCACCAA CTGGGCGGGG AGATCGTGGG CGTCGAATAC CTCGACGACC GGATTACGGA TTTCAACCCG CTCATAGACC GGATCCTTCA GCTCGAGGCG GATATATTGT TTTCCATCTG CGTCTTTCCC AACCACGACG CCTTTTATCT CCAATGGCAT CAGCGCGGTC TCAACCATAT CCCCAACGCC TCAACCATGG TCGCCGCCGA AGCTTACCAG AACGTCAGGT TTGCGCCCCC TGTGCTGGAA AATATGTACG TCATGGCTTC CTTTATCGAG GAGCTGAATA CGCCGGCGGC TCAAAGGTTT GTCAAAAAGT TCAGAGCGGC TTACGATCAC CGGGAAGTTC CCTATATGAG CATGGACACA GAGACCGTCT ATACGGCGAT GTATGTCTAT AAACGCGCCG TTGAGCTGGC GGGAACGACC GATACGGAAG AGGTCATTAC CGCCCTGGAA TCGGGAGCCG TTTATGTTGA CGGCCCTGGC GGCCGGGTGA CCGTGCGCGG AGAGGATCAT CATACCAGCA GAAGCCTGTC CTGTTTCCGG ATCAACAACC AGCACCGGGC AGAGGAGCTG TTTTGTACCA ACCCCATCCA TTCGGATTAC ATAGAATCCA TGATCGAGCA GACCATGGGC GTAAAGGGCG GCATCAAGGC CATGGGCGCC AACGCACCCA GCACCCAGTA CAATATGCTC CTGAACAAAT TCCGCTGGCA TCCCTCCTGA
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Protein sequence | MENRRRENQG VSTDPDKTAL MQAYEDLNSF IYTISHELKT PAREISLYAE FIEEDNKANL LPQSVEDIRS IRRTCDSMTM MVQRLMEYSK AGFKIIEQQQ ISAALLVRQC FDEIMRSVPG RKVELTVGDL PEIMGDLFLI KLMMTNILSN SIKFTREKAN ARINVTAKIL EDTLEFHFRD NGIGFDMAYA GRIFEAFQRL QDEDAYEGSG IGLATVKKIA QRFGGDASII GWPGKGCEVC VSFPGSLLKT PRDNRESERD VIKVGIIGDF TGICSELERG KVAAYKLAAD EINRMGGINE KKVELLFRDD RSLSELTREA VKELTEEERV DVLMGSTLSP SREIMQHYAD QTKTLYLDTQ QTEGGVSSHY TFCLSAMPEQ QMTQMLAYLL QKYGRKCYVV AADYNYGILS AEWVKYLVHQ LGGEIVGVEY LDDRITDFNP LIDRILQLEA DILFSICVFP NHDAFYLQWH QRGLNHIPNA STMVAAEAYQ NVRFAPPVLE NMYVMASFIE ELNTPAAQRF VKKFRAAYDH REVPYMSMDT ETVYTAMYVY KRAVELAGTT DTEEVITALE SGAVYVDGPG GRVTVRGEDH HTSRSLSCFR INNQHRAEEL FCTNPIHSDY IESMIEQTMG VKGGIKAMGA NAPSTQYNML LNKFRWHPS
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