Gene Dhaf_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3948 
Symbol 
ID7260968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4189129 
End bp4190013 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID643563870 
ProductABC transporter related 
Protein accessionYP_002460398 
Protein GI219669963 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATG TTCTGACAAC CCATGCCTTA AGCAAGCACT ACGGACAGTT TAAGGCCCTG 
AACGGACTTT CCCTCCACGT TCCCCAAGGA GCGATCTACG GCTTCGTCGG CAAAAACGGT
GCCGGCAAAA CCACTTTGAT CCGGCTGGTT TGCGGACTGC AAAGGCCCAC CTCCGGCGAT
TATTCCCTGT ACGGAGTATC AAGCCGGACA AGAGAGATTG TGAAATCCCG TCGCCGGATG
GGAGCGGTGG TGGAGACGCC GTCGATTTAT CTGGAGATGA CAGCCCGGGA AAACCTCAAG
GAGCAGTACC GTGTTCTGGG CTTACCCTCC TTTGAGGGAA TCCCGGAGCT TCTGGAGCTG
GTAGGACTGG CGGAAGCAGG CCAAAAGAAA GCCAAAAACT TCTCCCTGGG TATGAAGCAG
CGTTTGGGTA TCGCCGTGGC CCTCTGCGGT GATCCGGATT TTCTGGTGCT GGACGAGCCG
GTCAATGGGC TTGATCCCCA GGGCATTATT GAAATGCGGG AACTCATTTT AAAGCTTAAT
CGGGAGCAGC GGATCACCGT CCTTATTTCC AGTCATATCC TTGATGAACT GGCCAGGCTG
GCCACCCATT ACGGCTTTAT TGACGGTGGG CGCATGGTGA AAGAGATCAG CGCCGGGGAG
TTGGAAGAGG CTTGCCGCAA ATGCCTGCGT GTAGAGGTTT CTTCCACAGA AACGCTAGCT
CGGGTCCTGG ACGGCCTGCA GCTGGACTAT AAGATCCTTT CCGAACGCAG GGCCGATGTC
TTCGCTAAAG TCAATATCTC ACAGCTCACC CTGGCCCTGG CCCGGGAGGG CTGTGAGGTG
ATTTCCGTGC AGGAAAGGGA CGAAGGCCTG GAAGCTATTA TCTGA
 
Protein sequence
MDYVLTTHAL SKHYGQFKAL NGLSLHVPQG AIYGFVGKNG AGKTTLIRLV CGLQRPTSGD 
YSLYGVSSRT REIVKSRRRM GAVVETPSIY LEMTARENLK EQYRVLGLPS FEGIPELLEL
VGLAEAGQKK AKNFSLGMKQ RLGIAVALCG DPDFLVLDEP VNGLDPQGII EMRELILKLN
REQRITVLIS SHILDELARL ATHYGFIDGG RMVKEISAGE LEEACRKCLR VEVSSTETLA
RVLDGLQLDY KILSERRADV FAKVNISQLT LALAREGCEV ISVQERDEGL EAII