Gene Dhaf_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3938 
Symbol 
ID7260958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4175068 
End bp4176018 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content53% 
IMG OID643563860 
ProductCRISPR-associated protein, CT1132 family 
Protein accessionYP_002460388 
Protein GI219669953 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02590] CRISPR-associated protein, Csh2 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCG GCGAGATTTT GTTTGTCAAA TCGGTGAAGG ATGGGATACC CAACCGGGAT 
CCTTTGAATG ACAGTGACGC CAGGCGGTTG TTTCCCGAAG AGGACGGGCG TATCTCTTTA 
AGCGATGTGA GCATTAAAAG AGATGTGCGG GATTTTGTGA TTGCTCTGGA GCAGGACGGC 
GGTAAGGACC AGAAAAACCA CATCTTTGTT CAGGAAAAGG TGAATGACAA AGGGAAGCTG 
CTTGGCCGGG GCAGTTTGGC GGAAGGAATT GCCAAAAGCG TGGGCAAAGA GAAAAAGGCC 
AAGGAAGACA TGAAGAGTGT CCTGATTGAA CATTGCTTTG ATGTGCGCAC CTTCGGCATC 
GTCTACTCGG TGAAGCCTAA GTTCAACCTT ACCGGACCGG TTCAATTCGG GTGGGCCCAC 
TCCCTTCATC CTGTGGATAC CCAATATGTG CAAGGAACGG TGGTCATGCC CAGTATGGAT 
TCCACCGCTG ACGGAGAGGG AAAGACTCAG GGAACTATCT GGACCAGCTA TACGGTGCCC 
TTTGCCGTGT TTGCCATGCC GGCGGTGATC AACGCCAAGG CGGCAGAGCA CTCGGGAATG 
ACTGCTGAGG ATCAGGAACT GTTGCTCCGG GCACTGTGGC AGGGCACCCA GCACCGCCAG 
GCCCGGGGAA GAGGACAGCA GCAGCCCCTG ATATTGATCC ATATTGAATA TAGCGATCCC 
TTTTACCGGA TCGGTTATCT GGAAGATCTG ATCACCATGT CTCCCGATAC CACGGCCTGG 
AAAGCTGCTG GAAAGCTGCC TTCATCTCTC CAGGATGTTT CCTTCGATTT GACCCGGCTT 
TTAGCAGCTG TCGCAGAGAA GCAGGACAAG ATAGCCCAAT GCCGGATTTG GGCTCATCCA 
GGAGTGACCA TCAGCGGGGA TATCGCCCCT TGGCTGCAGC CTTTATGGTA A
 
Protein sequence
MNSGEILFVK SVKDGIPNRD PLNDSDARRL FPEEDGRISL SDVSIKRDVR DFVIALEQDG 
GKDQKNHIFV QEKVNDKGKL LGRGSLAEGI AKSVGKEKKA KEDMKSVLIE HCFDVRTFGI 
VYSVKPKFNL TGPVQFGWAH SLHPVDTQYV QGTVVMPSMD STADGEGKTQ GTIWTSYTVP 
FAVFAMPAVI NAKAAEHSGM TAEDQELLLR ALWQGTQHRQ ARGRGQQQPL ILIHIEYSDP 
FYRIGYLEDL ITMSPDTTAW KAAGKLPSSL QDVSFDLTRL LAAVAEKQDK IAQCRIWAHP 
GVTISGDIAP WLQPLW