| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3937 |
|---|
| Symbol | |
|---|
| ID | 7260957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4174329 |
|---|
| End bp | 4175024 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643563859 |
|---|
| Product | CRISPR-associated protein Cas5 |
|---|
| Protein accession | YP_002460387 |
|---|
| Protein GI | 219669952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0218624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAT TGGCATTTGA TGTCCTGGGC ACTGTAGGTC ATTTCCGCCG CCCCGACACC
ACGGCAACCC AGCTGACCTA TCCCTTTATT ACACCTACAG CGGCCAAAGG GCTGGTGGGG
GCGATTCTGG GGATTGAGGA TTTTGTGACC ACCGACCGGG TGGGTATTGA GCTGCTGCGT
CCGGTGCGAA CCGTAGCTCA GCAGATGTCC ATGCTGGGGA AAGATCCGGG AAGCACCTTT
AACCGTCCCA CCACTATTGA ATTGTTAGTC AATCCCGGCT ATCGCATTTA TTACACTGGG
GAAGAGTATA CAGAGCAGTT GCTGGATTTT CTCACTGGGG AAAGGGCGGT GTATACTACT
TATTTAGGTA CTGCTTATGC CCTGACTAAG CCGATACTCT ATAAGGTCTA CCCGGAAGTA
TCCTATCCTG TGGCGGAGGG AAAGGAAATT GAGATGAGGA CAGTTGTGCC TACGGCTCTT
ATCCGGGAGA TCGTTCTCAA GGCGGATCGC TACTATTGCC GGGCAGGTGG GTATTTGTAT
GAGTATAAAG GGCAGCGGAC CTTTGAGAAA TCAGTGGATT TCCTTTATGA GAAAGACGGG
AAGCCTATTG CGTTTATCCC TAAAAGCGAT GGCCCGGATT CGCCTTTGGA TCTCAGAGTG
GCGCAGTTCG GAGAGGACTT GGTATGTCTT GTTTAA
|
|---|
| Protein sequence | MKGLAFDVLG TVGHFRRPDT TATQLTYPFI TPTAAKGLVG AILGIEDFVT TDRVGIELLR
PVRTVAQQMS MLGKDPGSTF NRPTTIELLV NPGYRIYYTG EEYTEQLLDF LTGERAVYTT
YLGTAYALTK PILYKVYPEV SYPVAEGKEI EMRTVVPTAL IREIVLKADR YYCRAGGYLY
EYKGQRTFEK SVDFLYEKDG KPIAFIPKSD GPDSPLDLRV AQFGEDLVCL V
|
|---|
| |