Gene Dhaf_3916 details

Gene Information

• Locus tag: Dhaf_3916
• ID: 7260937
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 4153335
• End bp: 4155293
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 643563839
• Product: Fibronectin-binding A domain protein
• Protein accession: YP_002460367
• Protein GI: 219669932
• COG category: [K] Transcription
• COG ID: [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.182232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTAG ACGGCATTAC CCTGCATCAT TTGGTTCAGG AATTAGCCCC CCAACTGGCG 
GGGGCCCGCA TTGATAAAAT CACCCAGCCG GAGAAAGAAG AAATCCATCT CCAGCTGCGC 
AGCCAGGGCC AGTCTTACCG GCTCCTGCTC AATATCTCAG CCACAGCGGC ACGGCTGCAT 
CTTTCCCAAA CAAGCAAGAA AAACCCCGCT TCCCCTCCCA TGTTCTGCAT GATCCTGCGC 
AAACACATCG AGGGGGGCAA GATCCTGGCC CTGGAGCAGT TAGGATTGGA ACGGATCGTA 
CTTCTCACCG TGCAAAACTA TAACGAGTAT GGGGATTTGG CTACCCTTCA TCTTTATCTG 
GAAATCATGG GCAAGCACAG CAATCTTATT TTAGTGGATC CTCAAAGCGG CTTGATCCTG 
GATGGACTGA AGCGCTACTC CCATGCTTTA AGCCGTCATC GTGAGGTGCT GCCCGGACGC 
CTCTATCTCG CCCCTCCTTC CCAAGGAAAA GCCGATCCTC TGGCAAGTGA GGAAGAATGG 
CGCACCATCC TCTTCCGGGA TGGACTCAGC GAAAAAGTTG TGGACTTGCT GGTCAGGCAC 
TACGCGGGAA TCAGCCCGGA ACTGGCCCGG GAAATCATGA CCCGGTCCGG ATTGGCGCAG 
ACGATCACCC TTGATCAGTG CGGAGATATT GACCTCTCCC GGATTTTCCA GGCCTACACC 
CTTTTAGCCA ATCCAGCTCA TACTCCTCCT TTGGAGCCCA CCCTCTATTA TCAGGGAGCT 
GTTAAACTCA CCCGCCCCAA CCCTCTTCCT ACTGCCTTTA CCCTTCTGCC CTTCCAACAG 
TACCAGGGCC TTCCTGCCCA GAGCTTCCCC ACTCTGGCTG AAGCCGTGGC GAGTTTTTAT 
CAGAGCAAAG CCTCCAGCAA CACCCTGGAG GCCAAACGGG GTTCCCTGCG CAAAATTATT 
CAGGAGCAGC TCCAGCATCT GCACAAGAAA AAAGGCATCT ATGAGGATAC CCTGGCCACG 
GCCGCCAAAG GATTGAACTA CCAGCGCTGG GGAGAACTGC TTACAGCCAA CATCTACCGG 
CTTGAACTGG GGATGAAGGA GATTGCGGCG GAGGATTATA ATGAAGAATC TTTGCCCCAA 
GTAAATATTC CCCTGGACCC TCAGCTGACG GGGATTGAAA ATTCCCAACG CTATTACCGG 
CTTTACAATA AGGCCAAAGC CACTATTCAA AAAACAACGC CCCTTAAAGA CGCTGTGGAG 
GAGGAAATCG CTTATCTTAA TTCCGTTCTT TTAAGCCTGG AGCAAGCCAC TGTACCCTCT 
GAGCTGGATG AGGTTCATAA GGAACTGATT GAGGAAAACT ATTTGTCCGG CAAACACCAT 
GGCAAGCACC ATGGCAAGCC TTTGGCAGGG GAAGGAAAAA ATCCGGGGCA AAACAAACAG 
AAGGGCAAAC CTCATAAAAA CAGCAAGCAG GGACAGGGCG GCAAGGGTGC CAAGGATGCC 
AAAGGAGCTA AGCAGGGGGC TAAACAAGGT TCTAAACAGG GCTCTAAAGC CGATTCTCCC 
CAACCCAAAA TCTACTTTTC CAGTCAAAAC CGCCCCATTC TGGTGGGCAA AAACAATCGT 
CAGAATGATT GGCTGACCCT CAAAAAAGGC CGTCCCCAGG ACCTCTGGCT CCACACCAAG 
AATATCCCCG GCTCCCATGT GCTGATTCCC CTGGAAGAGG GTGAAGAGTT CCCCGATGAC 
GCCACTTTGG AAGAGGCGGC TGCCCTGGCT ATCCATTTCA GTCAGGCCAA GGGCTCCACT 
TTGGTTCCGG TGGATTATAC TCATGTGAAG AATATTAAAA AGCCTAATGC CGCCAAGCCC 
GGCATGGTCA TCTATGAGAA GAACTGGACC CTCTATCTGA CTCCCCAAGA GGAGATTGTG 
GAACGTCTGC TGGCCAGTGA GGGGGAGGAA ATGCCTTGA 

 

Protein sequence

MALDGITLHH LVQELAPQLA GARIDKITQP EKEEIHLQLR SQGQSYRLLL NISATAARLH 
LSQTSKKNPA SPPMFCMILR KHIEGGKILA LEQLGLERIV LLTVQNYNEY GDLATLHLYL 
EIMGKHSNLI LVDPQSGLIL DGLKRYSHAL SRHREVLPGR LYLAPPSQGK ADPLASEEEW 
RTILFRDGLS EKVVDLLVRH YAGISPELAR EIMTRSGLAQ TITLDQCGDI DLSRIFQAYT 
LLANPAHTPP LEPTLYYQGA VKLTRPNPLP TAFTLLPFQQ YQGLPAQSFP TLAEAVASFY 
QSKASSNTLE AKRGSLRKII QEQLQHLHKK KGIYEDTLAT AAKGLNYQRW GELLTANIYR 
LELGMKEIAA EDYNEESLPQ VNIPLDPQLT GIENSQRYYR LYNKAKATIQ KTTPLKDAVE 
EEIAYLNSVL LSLEQATVPS ELDEVHKELI EENYLSGKHH GKHHGKPLAG EGKNPGQNKQ 
KGKPHKNSKQ GQGGKGAKDA KGAKQGAKQG SKQGSKADSP QPKIYFSSQN RPILVGKNNR 
QNDWLTLKKG RPQDLWLHTK NIPGSHVLIP LEEGEEFPDD ATLEEAAALA IHFSQAKGST 
LVPVDYTHVK NIKKPNAAKP GMVIYEKNWT LYLTPQEEIV ERLLASEGEE MP