| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3907 |
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| Symbol | |
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| ID | 7260928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4144007 |
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| End bp | 4144858 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643563830 |
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| Product | Diaminopimelate epimerase |
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| Protein accession | YP_002460358 |
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| Protein GI | 219669923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.739136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCG TCAAAATGCA CGGCCTGGGC AATGATTTTG TCTTTATCGA TCACTTTCAG
GGCGCCCCGG CAGAGCTCCC CGATTATCCG GAGTTGGCCC GTAAGCTTTG CCACCGCCAG
TTCGGAGTGG GGGGAGACGG GCTGATTATG GTTCTGCCCT CGGATAAAGC GGACGCCAGG
ATGCGCATCC TGAATTCGGA TGGCTCAGAG CCGGAGATGT GCGGCAATGG CATTCGTTGT
TTTGCCCGCT ATATCTATGA TCAGGGCTAT GTTTCCCAAA ACCCCCTCCA GGTGGAGACC
TTGGCCGGGA TTCTTACCCT GCAGCTCAGC ATCACCGGAG ATCAAGTCAC CGGGGTGCGG
GTGGATATGG GGGAGCCGAT CCTCAAGTCG GAACAGGTTC CAGTACTTAT TCAGGGCGAT
CCTGTAGTGG GAGCCAGGCT TGATGTGGAT GGGCAGGAAT TCGAATTTAC GGCAGTGTCC
ATGGGCAACC CTCACTGCGT GCTCTTTGTG GAAGATTACG AAACCCTTGA TTTTGAGCGG
ATCGGCCCGG CCATTGAAAA ACATCCACTC TTTCCCCGCA AAACCAATGT GGAGTTTATC
ATCGTCAACA GCCCCCGGGA ACTGACCATG AAGGTATGGG AGCGGGGAGC GGGTCCCACC
CTGGCCTGCG GAACAGGGGC CTGCGCTTCT GTAGTGGCCG CCGTCCTTAA CGGCAGGACG
GAGCGTAAGG TCACCGTTCA TTTGCCGGGA GGCGATCTCC TGATTGAATG GGGAGAGGAT
AACCGGGTGT ACATGACCGG ACCGGCGGCC TATGTATTTA AAGGGGTTTT GCTGGAGGAT
GCCCTCAGCT AA
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| Protein sequence | MEIVKMHGLG NDFVFIDHFQ GAPAELPDYP ELARKLCHRQ FGVGGDGLIM VLPSDKADAR
MRILNSDGSE PEMCGNGIRC FARYIYDQGY VSQNPLQVET LAGILTLQLS ITGDQVTGVR
VDMGEPILKS EQVPVLIQGD PVVGARLDVD GQEFEFTAVS MGNPHCVLFV EDYETLDFER
IGPAIEKHPL FPRKTNVEFI IVNSPRELTM KVWERGAGPT LACGTGACAS VVAAVLNGRT
ERKVTVHLPG GDLLIEWGED NRVYMTGPAA YVFKGVLLED ALS
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