Gene Dhaf_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3902 
Symbol 
ID7260923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4136622 
End bp4137656 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID643563826 
Producthypothetical protein 
Protein accessionYP_002460354 
Protein GI219669919 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000029197 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CCTTATCGAG GACTATACCA ATACTGATCA TGTTTTTCCT GATGCTGACC 
TTAGCGGCTT GCGGCACTGC CCAGCCGGCC CAGTCGGCAG GACCCAAAAA CCAGGAAACT
CAAGGAACTC AGGAAACGGC CTCGGAACCC ATGACCATTA AAGTCGGTGT GCCCACCGCA
CCTCCGGCCC TGCCTGTTCT GCATATGATG GAGACCAAGG CCCTGGGTGA GAATGTGAAC
ATCGAATTGT CCATCTGGGA TGAACCGGAA ACCTTAATCG CCATGGTTCA GGACGGCGAA
CATGCCCTGT TTGCTTTTCC CCTGACGGTG GTCTCCAAAC TCTATAACAA AGGGTTGGAC
GTGCGCTTAA TGAATGTCAA CACCTGGGGA GTCACCTACT TTTTGACCTC CGACCCCGAC
ATAAAAGAGT GGCAGGATCT GAAAGGGAAG ACAGTGTATG TGCCCTTGCA GTCCTCGCCG
CCGGATGCTT TAACCCAGTA TTTCCTCCAT GAAGCCGGTC TGGAAGCAGG CAAAGACCTG
GAGATCATCT ATGCCTCAAC TCCGGAAATC GCCACACTCC TTGCTTCAGG CAAGGCTGCC
TATGCAACCC TCATCGAACC ACAGGTGACA AGAGCTTTGC TGGCTAACCC CCAATTGCGG
ATTGCCTTTA GTTTCGAAGA GGAATGGCAG AGGGTGAACG CTACGGACAC CAAAATACCT
AATGCCGGTT TCGGAACAAC CCAGAAATTC ATCGACGCTT ATCCGGAATT AACAGCTCAA
TTCCAGGAAG CCTATGCCCA ATCCACCCAA TGGGCTAATG AGAACCCTGA GCAAATGGGT
GAACTGGCCG AAAAGTATTT GGGGTTGAAA AAAGAGCTGG TGGCCAAAGC CTTGCCCAGT
ATGGGTCTGA CCTTCCAAAG CGCCCAGGAT TCCAAAACAG AACTGAAGAT GTTCTATGAG
CTGCTCTGGA ATTTTGAACC CTCCATGATT GGGGGAAAGG TTGCCGACGA CGGCCTGTAT
TATGGTGGTA AGTAA
 
Protein sequence
MKKTLSRTIP ILIMFFLMLT LAACGTAQPA QSAGPKNQET QGTQETASEP MTIKVGVPTA 
PPALPVLHMM ETKALGENVN IELSIWDEPE TLIAMVQDGE HALFAFPLTV VSKLYNKGLD
VRLMNVNTWG VTYFLTSDPD IKEWQDLKGK TVYVPLQSSP PDALTQYFLH EAGLEAGKDL
EIIYASTPEI ATLLASGKAA YATLIEPQVT RALLANPQLR IAFSFEEEWQ RVNATDTKIP
NAGFGTTQKF IDAYPELTAQ FQEAYAQSTQ WANENPEQMG ELAEKYLGLK KELVAKALPS
MGLTFQSAQD SKTELKMFYE LLWNFEPSMI GGKVADDGLY YGGK