Gene Dhaf_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3896 
Symbol 
ID7260917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4129097 
End bp4129966 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID643563820 
Producthypothetical protein 
Protein accessionYP_002460348 
Protein GI219669913 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000579804 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGGT TTGGCAGGGG GGAAGCCTCC GGTTACGGTT ACCAATTCAC CATCGAGCTG 
AAAGCGGTCA ATCATCGCTT TTTCGAGACG TCGGTACGGA TGCCCCGCCA TCTGAATAGT
TTAGAAGATA GAATACGCAA AATCCTGCAA AGCAAAATCA ACCGCGGACG TATTGATGTC
TATGTTAATG TGAAGGAAAC CGAAGAAAAA AAGAGATTGG TGAAGGTTGA CAAAGATTTA
GCCCTGTCGT ATGATAAGAC ACTGAAGGAA CTCGCTTTAG CCCTCAATAC AACCTATGAG
ACGGATATTT ACCGTTTAGC TGCCTTGCCC GAGGTTTTTG ACCTAGAGGA TACGGATATT
GATCTGGAAC TGATTTGGGA ACCCTTGAGC CGTGCCGTAG CCGAGGCTTT GAATGGCTTC
ACAGCCATGC GGCAGGTGGA AGGGGAAGGC TTAGCGGCAG ATCTTTTGCA CCGTTTACAT
ACCATCATGC TGGCTAAAGA TGAAATAGCA GGTTATACCG ACAGCATCGT TATAGATTAT
CAAACCCGCT TACAGGAGAG GATAGAGGTC CTTCTGGGAG ATAAGGCCAT TCTCGATGAA
GCTCGCCTGG CCAATGAAGT GGCTTTTTTT GCAGACAGAG CATCCATTAC CGAAGAATTG
GTTCGTCTGC AGAGCCATAT TGACCAAGGC CGGGAAGCTC TGCAAAGCTC TGAACCCGTC
GGGCGCAAGC TGGATTTTCT GGTTCAGGAA ATGAACCGGG AGATCAATAC CATTGGCTCG
AAGGCTAATA ATTTAAGCAT TACTCAGCAT GTCGTTCAGA TGAAAAGCGA ATTAGAGAAA
ATTCGGGAAC AAGTTCAAAA TCTGGAATAA
 
Protein sequence
MTGFGRGEAS GYGYQFTIEL KAVNHRFFET SVRMPRHLNS LEDRIRKILQ SKINRGRIDV 
YVNVKETEEK KRLVKVDKDL ALSYDKTLKE LALALNTTYE TDIYRLAALP EVFDLEDTDI
DLELIWEPLS RAVAEALNGF TAMRQVEGEG LAADLLHRLH TIMLAKDEIA GYTDSIVIDY
QTRLQERIEV LLGDKAILDE ARLANEVAFF ADRASITEEL VRLQSHIDQG REALQSSEPV
GRKLDFLVQE MNREINTIGS KANNLSITQH VVQMKSELEK IREQVQNLE