Gene Dhaf_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3893 
Symbol 
ID7260914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4127981 
End bp4128187 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content45% 
IMG OID643563817 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_002460345 
Protein GI219669910 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.00496166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGC CTTCCCTCGA TATTTTGTTG AGCAAAGTGG ACAGTAAATA TACCTTGGTG 
CTGGCGGCGG CGAAACGGGC CCGTACCCTC ATGGAGGATC CGGAGTTTGA AGTGAATTAC
CGCGGTTCCA AACCGGTAAG CCTTGCTTTT GATGAAATCG CCAAAGGGAA ATATCATTTT
GAATTAACCC GTGAAGGAAT TAAATAA
 
Protein sequence
MKQPSLDILL SKVDSKYTLV LAAAKRARTL MEDPEFEVNY RGSKPVSLAF DEIAKGKYHF 
ELTREGIK