| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3869 |
|---|
| Symbol | |
|---|
| ID | 7260890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4108410 |
|---|
| End bp | 4109129 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643563793 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002460321 |
|---|
| Protein GI | 219669886 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 87 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA TTTTTGACTG CAAACTTTTG TTAGTGGATG ATGAGCCGGA TCTGCGCGGG
ATGCTGGTGG AGATTCTCCA CAAAGAAGGC TTTCAGCGCG TCCGGACAGC AGCCAGCTGC
CAACAAGCAA AAGAGCTGTT CCAAACAGAA CAGCCCCAGG TTGTGATTTT GGATGTCTCC
TTGCCCGACG GAGACGGCTT TTCATTAATG TCCGAGTTCA GAAGTATTTC CGCAGTGCCG
GTGCTGTTTC TGTCGGCACG GGATGAGGAC GAGAACCGTT TGCTTGGCTT GGGACTTGGT
GCCGACGATT ATATTACCAA GCCTTTTCTG CCCCGGGAAC TGCTGCTTCG GCTCAAGGCC
GTGCTGACTC GAACCTATTT TCCCCCCACC CTGCGGCAGA GCAAGAAACC CCTCTTCCGT
CTGGGGGAAG CGGTGGTGGA TCTGAACAGC GCCTTGGTAA CCCGTCCCCA GGGTCAGGTG
ACCCTGACCG CCAAAGAATA TATCTTATTG GCAAAACTGT ATGAAAACAG GGGCAGCATC
GTCACCGGAG ACAGTCTGTG CCGGGCGGTC TGGGGGGATG ATCTGTACGG ATATGAGAAT
ACGCTGATGG TGCACATCCG CCGCCTGCGG GAAAAGATAG AACCGGAACC CTCTTCTCCC
CGCTATCTCC TCACGGTGCG GGGGTTAGGA TACAAGCTGA CCGGGGTGGT GGAAAAATGA
|
|---|
| Protein sequence | MNTIFDCKLL LVDDEPDLRG MLVEILHKEG FQRVRTAASC QQAKELFQTE QPQVVILDVS
LPDGDGFSLM SEFRSISAVP VLFLSARDED ENRLLGLGLG ADDYITKPFL PRELLLRLKA
VLTRTYFPPT LRQSKKPLFR LGEAVVDLNS ALVTRPQGQV TLTAKEYILL AKLYENRGSI
VTGDSLCRAV WGDDLYGYEN TLMVHIRRLR EKIEPEPSSP RYLLTVRGLG YKLTGVVEK
|
|---|
| |