Gene Dhaf_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3864 
Symbol 
ID7260885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4102976 
End bp4103638 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content55% 
IMG OID643563788 
ProductSNARE associated Golgi protein 
Protein accessionYP_002460316 
Protein GI219669881 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATA GAAAGCCTTG GCTCTTTTTG GGGTTAGCTG TACTGGTGTT AATCGGCAAC 
CTTATCTTCG GTTGGTCGGA TGATCTTGCC AACCAGGAGA CTCTGCCCCT TATGCGCCGC 
GCTCTGGAGG ATAACTTTGC CCTGGCCCTG CTGCTCTACG GGGTCCTTAC CGTGGCCGGC 
TGTGTGCTGC TGGCTTTGCC GGGGGTGACC TTTGCTATTG TAGCCGGGGT GCTTTTCGGT 
CCTGTATGGG GAACCTTGGC CTGCTGGTTG GCCGTGACCC TGGGCGCCTG CCTGTCTTTT 
CTGGCCGGGC GCTACTTTCT CAAGGATACG CTGAAGCCCC AATTAGAGAA GAACAGCTAT 
CTCAACCGCC TGCTCTTTGC GGGAGCGGGA CAGAGAGATG TATTTTTGTT GGCGATCACC 
CGGCTGGTAC CGCTTTTCCC CTATAATCTG CAAAATTTTG CTTACGGCAT CACTGACATC 
AGATTCCTGC CCTATGCCTT GTACTCGGCC CTTTTTATGC TACCGGGCAC TGCGGCCTAT 
ACCGTAGGGG CGGCAGGAGT GGCCAGCCCG GAGAGACGGG GTCCTTATCT CATAGTTGCA 
GGGGTCTTGC TGGCCGTTGT GTTGACATTA TCCTTCATAT TGAAGAAGGG GGTGAAGGAG 
TGA
 
Protein sequence
MNNRKPWLFL GLAVLVLIGN LIFGWSDDLA NQETLPLMRR ALEDNFALAL LLYGVLTVAG 
CVLLALPGVT FAIVAGVLFG PVWGTLACWL AVTLGACLSF LAGRYFLKDT LKPQLEKNSY 
LNRLLFAGAG QRDVFLLAIT RLVPLFPYNL QNFAYGITDI RFLPYALYSA LFMLPGTAAY 
TVGAAGVASP ERRGPYLIVA GVLLAVVLTL SFILKKGVKE