Gene Dhaf_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3860 
Symbol 
ID7260881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4100216 
End bp4100899 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID643563784 
Productglycosyl transferase family 2 
Protein accessionYP_002460312 
Protein GI219669877 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCCG TCATTATCCC GGTTTACAAC GAGGAACAGA CCCTGGCTAC TTTTTTACCC 
TCCCTGGACA GCCTGGCGGG AGAGCATGAG GTGCTGTTTT CCGACGGGGG CAGCACTGAC 
GGTACTTTGG AACTGCTGAC AGGTCACCGG GTGATAACGG GGGCCAAAGG GCGGGCTGCT 
CAATGCAACC GGGCTGGGGC TGAGGCCCGG GGGGATGTGC TCTTCTTTCT TCACTGTGAC 
AGCATCGTCC CTGCCGACGC CCTCTTCCAC ATCCGGGCTG CTGTGGACAG GGGAGCGAGG 
TGGGGCTGTC TCACCCTCCG CTTTGACAAT ACTGGTCTTC TCTATCGGCT GGGCGGGCAC 
ATGTCTAACC TGCGGGTGCG CTGGGGGCAC ATCGCCTTCG GAGATCAGGG GATTTTCGTG 
ACCCGGGCCC TTTTTGAGCA AGTAGGAGGC TTTCCGGAGC TGCCGATTAT GGAGGATTAT 
GAATTTTCCC TGGGGCTGAA GCGCATGAAG GTATTTCCGG TGCAGGTGAA GAGCCGGATC 
ATTACTTCAT CCCGGCGCTT TCAGGCGGGT GGGATCTTCC GGGTGACCTG GTCTATGCAG 
CGGCTGCGGG CTATGTACCG CCGGGGGGTG GACATTGAGA CCATCAGCCG GGAATATCGT 
GATGTGAGGA GAGGCAATGA GTAA
 
Protein sequence
MISVIIPVYN EEQTLATFLP SLDSLAGEHE VLFSDGGSTD GTLELLTGHR VITGAKGRAA 
QCNRAGAEAR GDVLFFLHCD SIVPADALFH IRAAVDRGAR WGCLTLRFDN TGLLYRLGGH 
MSNLRVRWGH IAFGDQGIFV TRALFEQVGG FPELPIMEDY EFSLGLKRMK VFPVQVKSRI 
ITSSRRFQAG GIFRVTWSMQ RLRAMYRRGV DIETISREYR DVRRGNE