| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3857 |
|---|
| Symbol | |
|---|
| ID | 7260878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 4098590 |
|---|
| End bp | 4098982 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643563781 |
|---|
| Product | HEPN domain protein |
|---|
| Protein accession | YP_002460309 |
|---|
| Protein GI | 219669874 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00179967 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACA AAGTTGAGTA CTGGTTTAGC ATAGCCGATT ATGATTTTGA AACTGCAAAG
GCAATGTTAG AAACAAAGCG GTATCTATAC GTCGGCTTTA TGTGCCATCA AACAATAGAA
AAGGCACTCA AAGCAATTAT TGCCCGCGAC TGCGCCGATG GGGAACTACC GCCAAAAACT
CACGACTTGA CAAAACTATC CATTAGGGCA AAACTCATAG ACATAATGAG CGACGAACAA
CAGGATTTTA TTGAGGAATT AAACCCGCTG AACATTGAAG CGCGTTACCC GGAATATAAA
GAGCGTATAG CGCAAACGCT TGATAGCGAG GTAGGTCAAA CCCTTATCAA GAGAACGGAG
GGGCTTTTAT GTTGGATAAA GGAACAGTTA TAA
|
|---|
| Protein sequence | MDNKVEYWFS IADYDFETAK AMLETKRYLY VGFMCHQTIE KALKAIIARD CADGELPPKT
HDLTKLSIRA KLIDIMSDEQ QDFIEELNPL NIEARYPEYK ERIAQTLDSE VGQTLIKRTE
GLLCWIKEQL
|
|---|
| |