| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3854 |
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| Symbol | |
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| ID | 7260875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4093917 |
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| End bp | 4096244 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643563778 |
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| Product | primosomal protein N' |
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| Protein accession | YP_002460306 |
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| Protein GI | 219669871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0030151 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATTATG CAGAAGTTCT TGTTGATGTG GCCAATCGTC GCCTTGATCA GGTGTTTCAC
TACCAAATTC CTGAAGGGCT ATCCTTAAAA AGAGGGATGC GCGTCCTTGT CCCTTTGCAA
TATCGTCAAG TTCAAGGCGT GGTGGTCCGG ATCACGGAGC AGCTGCCCCA GGAGATAGCG
CACTCGGCTC TAAAACCCAT TTTGGGGATT GTTGACACTA TGTATGTCGT TCCTGAAGAT
CTTGTGGATT TAGCTCTGTG GCTGGCGGAG ACGACCATTT GCTCCATCGC CCAGAGTCTT
CATACCGTTT GGCCCCTGCT CAAGGGTAAG GTGGAAGAGT ATGTCATTCC TATGGCTTCC
CAGGAGGATG AGGATGTTAA GGCCTTAAAA ATCCTGGATT CAGAGACCTA TCAGGCTTTG
GCGGTTATCT TTCGGTCGCG GAATAAGACA TTGCCCCTGA GCACCTATCT TAAGCGTTCA
GGGCTGTCCA AGACTCAGGT AGAGCACTTA GCCAAACAAG GCTGGCTCAA ACTGGAATCC
CGCTTTACCT CCGGTGTTCC CCGCAAGGTC CAGGCTGCGC TTACTCCCGA AGAGAGGGTT
GGCGATGACC TGGGAGATAG GGAATCGATG ACCGGTATGA TGCATGAAGC CGATATTGAA
CTTAATGTTC ACCAGGGACC GGATTACCTG CGGACACTCA CTCCTGAACA AGGGAAAGTA
TGTGAAAAAG TTACTCAGGC CCTGGATAAA CAAAGTTATG AAACCCTGCT CTTGCATGGG
GTTACCGGCA GCGGCAAGAC GGAAGTCTAC CAAAGACTGA TTGGGGAAGT GCTGGTTAAA
GGTGGTTCAG CCATTTTATT GGTTCCTGAG ATTTCGCTGA CGTCTCAGAT CGCCCGCTAT
TTTCAAGACC AATTCGGCGA GCAGTTGATT GTACTTCACT CGGGATTGCA AGTGGGGGAA
AAGGCCAAGG CCTGGCAGGA TATTCTCCAG GGGAAAATCA GGATTGTCGT CGGGGCCCGT
TCGGCGGTTT TTGCCCCGCT GCCTGATTTA CGCTTGATCA TCTTGGATGA AGAGCATGAG
AGCGCCTATC ACCAAGAGGA AAATCCCAAA TACCATGCCC GCAATGTAGC CCGTAAACGG
ATGGAACAGC TCCGGGGAGT AGTGCTTTTG GGAAGCGCTA CCCCTTCGCT GGAAGCCTAT
GCCGCGGCTC AGACCGGCAA GGTTCCTTTG CTTACCATGG AAGAACGGGT CAACCGCCGC
CCGCTGCCCC CTGTGGAAGT GGTGGATATG CGGGAGGAAT TGATTAAAGG GAATCGCAGT
ATGTTTTCCC TCTCCCTGCA AGACAAGCTG AAAAGGACCC TGGAGCGGGG AGAACAGTCC
ATGCTGTTCT TAAACCGCCG CGGCTACTCC ACCTTTGTGG TCTGCCGGGA ATGCGGTTAT
GTGATTCGCT GTCATGACTG TGATATTGCT CTGACTTACC ATACTCAAGG CCACACCATG
CGTTGCCATT ATTGCAATCA TGAAGAGGTT CCTCCCCGCA CCTGTCCGGA ATGCGGCAGC
CGCTATATTC GCTTTTTTGG GCAAGGGACT CAGCGGGTGG AAGATGAAAT CAAAGGACTT
TACCCGGCGG CACGAATCCT CCGCCTGGAT TTTGATACCA CCCGCTCTAA AGATGCCTAT
GAGGACATCC TGGGCAAATT CCGCCGCCAG GAGGCAGATA TCCTCGTGGG CACCCAGATG
ATGGCCAAGG GACTGGATTT TCCTAATGTC ACTTTAGTAG GAGTTGTGGC AGCCGATCAG
ATGCTGAATA TGCCGGATTT CCGCGCCAGG GAGAGAACCT TCCAGCTTCT GACCCAAGTG
GCCGGCCGGG CCGGCCGCAG TCAAAAACCC GGGCAGGTTG TGATTCAGAC TTATACACCG
GAAGACAGGG CGATTATTCA AGCCTCTCAG CACAATTTTA AGGGCTTCTT TTGGGAAGAG
ATTGGCTATC GGAAAGCCAG AAATTATCCT CCCTTCACCC ATGTCATCCG GGTGACCCTT
ATTCATGAAA AGGAAGAGAA AGTGATCAAA GGAGCCCATA GCCTGGTCAA TTCTTTAAGG
CAGGGAATAG TATCCGATCA AAATGGGCAT ACTTCTTTAG ATATTCTCGG CCCTGCTCCG
GCTGTGATTC CCCGCCTCAA AAATCATTTC CGCTGGCAGG TCTCGGTTAA AGGAAAACTT
ATGGATACAC TACGTGAATT CTTGCATCAA GGTGTCCGGC GTTTTGCACG TGATCCCATT
AGTTCGGGAA TTCAACTCAA TATCGAAGTA GATCCCTTAA GCATGTAA
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| Protein sequence | MHYAEVLVDV ANRRLDQVFH YQIPEGLSLK RGMRVLVPLQ YRQVQGVVVR ITEQLPQEIA
HSALKPILGI VDTMYVVPED LVDLALWLAE TTICSIAQSL HTVWPLLKGK VEEYVIPMAS
QEDEDVKALK ILDSETYQAL AVIFRSRNKT LPLSTYLKRS GLSKTQVEHL AKQGWLKLES
RFTSGVPRKV QAALTPEERV GDDLGDRESM TGMMHEADIE LNVHQGPDYL RTLTPEQGKV
CEKVTQALDK QSYETLLLHG VTGSGKTEVY QRLIGEVLVK GGSAILLVPE ISLTSQIARY
FQDQFGEQLI VLHSGLQVGE KAKAWQDILQ GKIRIVVGAR SAVFAPLPDL RLIILDEEHE
SAYHQEENPK YHARNVARKR MEQLRGVVLL GSATPSLEAY AAAQTGKVPL LTMEERVNRR
PLPPVEVVDM REELIKGNRS MFSLSLQDKL KRTLERGEQS MLFLNRRGYS TFVVCRECGY
VIRCHDCDIA LTYHTQGHTM RCHYCNHEEV PPRTCPECGS RYIRFFGQGT QRVEDEIKGL
YPAARILRLD FDTTRSKDAY EDILGKFRRQ EADILVGTQM MAKGLDFPNV TLVGVVAADQ
MLNMPDFRAR ERTFQLLTQV AGRAGRSQKP GQVVIQTYTP EDRAIIQASQ HNFKGFFWEE
IGYRKARNYP PFTHVIRVTL IHEKEEKVIK GAHSLVNSLR QGIVSDQNGH TSLDILGPAP
AVIPRLKNHF RWQVSVKGKL MDTLREFLHQ GVRRFARDPI SSGIQLNIEV DPLSM
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