Gene Dhaf_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3853 
Symboldef 
ID7260874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4093298 
End bp4093750 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content51% 
IMG OID643563777 
Productpeptide deformylase 
Protein accessionYP_002460305 
Protein GI219669870 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTT ATCAGATTGT AGAAATTGGT TCCGAAGTAC TGCGGGAGAA AGCTGTTCCC 
GTCAAAGAGA TAACACCTAA TATTGCAAAG CTTTTAGATA ATATGTTGGA TACACTCTAT
GATGCCAATG GAGTAGGCTT GGCCGCTCCC CAGGTGGGAG TCTCCAAACG CGTCGTCGTT
ATCGACGTAG GAGAAGGCCC CTTGGAGCTA ATCAACCCTG TCATCATCGC CAAAGAGGGC
GAAGATCTGG ATGATGAAGG ATGCTTAAGC ATCCCCGGCA TAACCGGTCA GGTAGCCCGG
GCAGCCAAAG TCAAAGTAGA AGCCCTCAAC CGCCAGGGGG AGCTCCAGGT CATCGAAGGA
GAAGGACTGC TTTCCCGCTG CCTCCAGCAT GAAATCGACC ACCTGGAAGG GATCTTGTTC
GTTGATAAAG CGAAGAAGAC TTCTCGGAGG TAG
 
Protein sequence
MAIYQIVEIG SEVLREKAVP VKEITPNIAK LLDNMLDTLY DANGVGLAAP QVGVSKRVVV 
IDVGEGPLEL INPVIIAKEG EDLDDEGCLS IPGITGQVAR AAKVKVEALN RQGELQVIEG
EGLLSRCLQH EIDHLEGILF VDKAKKTSRR