Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3853 |
Symbol | def |
ID | 7260874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4093298 |
End bp | 4093750 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563777 |
Product | peptide deformylase |
Protein accession | YP_002460305 |
Protein GI | 219669870 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTT ATCAGATTGT AGAAATTGGT TCCGAAGTAC TGCGGGAGAA AGCTGTTCCC GTCAAAGAGA TAACACCTAA TATTGCAAAG CTTTTAGATA ATATGTTGGA TACACTCTAT GATGCCAATG GAGTAGGCTT GGCCGCTCCC CAGGTGGGAG TCTCCAAACG CGTCGTCGTT ATCGACGTAG GAGAAGGCCC CTTGGAGCTA ATCAACCCTG TCATCATCGC CAAAGAGGGC GAAGATCTGG ATGATGAAGG ATGCTTAAGC ATCCCCGGCA TAACCGGTCA GGTAGCCCGG GCAGCCAAAG TCAAAGTAGA AGCCCTCAAC CGCCAGGGGG AGCTCCAGGT CATCGAAGGA GAAGGACTGC TTTCCCGCTG CCTCCAGCAT GAAATCGACC ACCTGGAAGG GATCTTGTTC GTTGATAAAG CGAAGAAGAC TTCTCGGAGG TAG
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Protein sequence | MAIYQIVEIG SEVLREKAVP VKEITPNIAK LLDNMLDTLY DANGVGLAAP QVGVSKRVVV IDVGEGPLEL INPVIIAKEG EDLDDEGCLS IPGITGQVAR AAKVKVEALN RQGELQVIEG EGLLSRCLQH EIDHLEGILF VDKAKKTSRR
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