Gene Dhaf_3844 details

Gene Information

• Locus tag: Dhaf_3844
• ID: 7260865
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 4082827
• End bp: 4084566
• Gene Length: 1740 bp
• Protein Length: 579 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643563768
• Product: serine/threonine protein kinase with PASTA sensor(s)
• Protein accession: YP_002460296
• Protein GI: 219669861
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [S] Function unknown; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase; [COG2815] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.501201
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCAAGA TATTGAGTAA TCGCTATGAA ATAATTGAAA AGATCGGGTC CGGCGGTATG 
GCCATTGTCT ACAAAGCCAA GGATCTTTTA TTGAACCGGA TCGTCGCCAT TAAAATTCTC 
CACGAGCAGT TTACCGCAGA CGAGGAATTC GTCCGCCGTT TCCGCAGGGA GGCCCAGTCG 
GCAGCCAGTC TGTCCCACGC CAATATCGTC TCCATCTACG ATGTGGGCAA GGACGGTGAG 
ACGGAGTACA TTGTCATGGA GCATATCGAG GGACAGAACC TGAAGGATAT CATCCGCAAT 
TATGCCCCCT TATCCACGGA ACAGACCCTG GAGCTGGGCA TCCAGATTGC GGAGGCCATC 
CGCCATGCCC ATGAGCATCA TATTATTCAC CGGGATATTA AACCTCATAA TATTCTGGTT 
ACCGAAGACG GGCGGATCAA GGTCACTGAT TTCGGCATCG CCCGGGCTGT TTCAGCAGCC 
ACCATGACCC ATACGGGAGA TATCGTGGGT TCGGTTCATT ACCTCTCTCC GGAACAGGCC 
CGGGGAATCC AGACCAACGA ACAATCCGAT CTCTATTCTT TAGGGATTAT TCTCTATGAA 
CTCTTGACAG GGAAGGTGCC CTACGACGGC GAGACCCCGA TCTCCATTGC TCTTAAGCAT 
TTGCAGGAAT TAGCCGTCCC TCCCAGCAAG CTGAACGCCA GGGTCAGTCC TGCTTTGGAG 
AATCTGGTGA TGAGATCCAT TGCCAAATCT CCGGATCAGC GCTATGCTAC GGCCAAAGAT 
CTCTTGCAGG ATCTGCGCAA AGTTCAGGCC GGCTTGCCTG TGGACAAGAC GGTGGATGAG 
GACCAGGACT TAGAAAGCAC CCGGGTCCAC AGCTCGCTAA GGGCCGGAGT GAACTCAGCT 
TTAGCTTCCG AGGAAAAGGA AGCAGGCCGG AAAAAGGCTA AGGTCCCACT ATTTCGTAAA 
CGCTGGCCTT GGGTGGCTTT GCTGGCCTTG GTACTGATCA TGGGGGGAGG CTGGGTTGCT 
TTATCCCAAT GGTTTAATGT AGGAACCACG ACGGTTCCTC CCTTGGTGGG AAAAACAATT 
CAGGAAGCCG GTTATTTTGC TGAACAAAAA GGTTTATCCT TAGACCCGAA CACTCAGGAA 
GAATACAATA ATGACATGGA GAAGGGGAAG ATTACCCGAA CCGACCCTGA AGAGGGTGCC 
GTTGTGAAAA AAGAACGGGG CATCAAGGTC TGGGTGAGCT TAGGTCCCGA ACAAGCAAGA 
ATTCCTAACC TTAAGACCGG AGATATCACT CAGGAAGCGG CCATTAATTT TTTAGAGAGC 
CAGGGTTTCA AAAGAGATAA CATTGTTGCC CAGGAGGATC AAAACTCTTC TCTGCCCAAA 
GGCATTGTGG TGGAGCAGGA TCCCGCCCCG GGTTCAGACT GGCCCAAAAA TGGGAAGATC 
ACCTTAACGG TCAGCGCCGG GAAAGTCGAT GAACCGAAGC CCATGCCCAA TGTCATTTCC 
AGATCACCGG CTGATGCTAA AGCAATTCTG GAGCAGCAGT ATGAGTTAAA AGTGATCGTG 
GACAGTGAAA ATTCCACCGA ATATCCGTCG GATGTGGTGA TGGCAACCGA TCCTAAACCA 
GGTGATATGG TTAAAAAAGG AGATACGGTC AGGATCATCA TTTCCCGGGG GCCGGGGCCT 
ATAGCCTTTA ATCCGGTTAT TTTAGGCCAT GTGGCCAAGC TGGATAAAAT TGCGCAATGA 

 

Protein sequence

MSKILSNRYE IIEKIGSGGM AIVYKAKDLL LNRIVAIKIL HEQFTADEEF VRRFRREAQS 
AASLSHANIV SIYDVGKDGE TEYIVMEHIE GQNLKDIIRN YAPLSTEQTL ELGIQIAEAI 
RHAHEHHIIH RDIKPHNILV TEDGRIKVTD FGIARAVSAA TMTHTGDIVG SVHYLSPEQA 
RGIQTNEQSD LYSLGIILYE LLTGKVPYDG ETPISIALKH LQELAVPPSK LNARVSPALE 
NLVMRSIAKS PDQRYATAKD LLQDLRKVQA GLPVDKTVDE DQDLESTRVH SSLRAGVNSA 
LASEEKEAGR KKAKVPLFRK RWPWVALLAL VLIMGGGWVA LSQWFNVGTT TVPPLVGKTI 
QEAGYFAEQK GLSLDPNTQE EYNNDMEKGK ITRTDPEEGA VVKKERGIKV WVSLGPEQAR 
IPNLKTGDIT QEAAINFLES QGFKRDNIVA QEDQNSSLPK GIVVEQDPAP GSDWPKNGKI 
TLTVSAGKVD EPKPMPNVIS RSPADAKAIL EQQYELKVIV DSENSTEYPS DVVMATDPKP 
GDMVKKGDTV RIIISRGPGP IAFNPVILGH VAKLDKIAQ