Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3842 |
Symbol | |
ID | 7260863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4081224 |
End bp | 4081898 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563766 |
Product | Ribulose-phosphate 3-epimerase |
Protein accession | YP_002460294 |
Protein GI | 219669859 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0107323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA TTGCGCCCTC CATTTTATCG GCAGACTTTG CCCATTTGGG AGATCAGGTT GCCTTAGTGG AAAAAGCAGG GGCTGAAGTC TTACATATTG ATGTGATGGA TGGGCATTTT GTACCCAACA TTACCATTGG CCCCCTGGTG GTTAAAGCGC TGCGGCCTTA TTCCCAGATG CGCTTTGATG TCCATTTAAT GATTGAACAT CCGGAACGCT TTATTGAGGA ATTCGCGAAA GCCGGGGCGG ATCATATTAC AGTGCATCTG GAAGCCACGC CCCATATCCA TCGTGCCATC CAGCAGATTA AGGGGTTAGG TCTTACCGCA GGAGTTTCCA TTAATCCGGC CACCCCTTTG GACGGAATCA AGTACATCCT CGATGAATTG GATATGGTTT TGATTATGAG CGTTAATCCG GGCTTTGGGG GGCAGAAATT TATCCCCGCG GTTCTTCCTA AGATTGAAGT TCTTCACCGG CATCTCGATC AGATGCAATC CTCTTGTGAG ATTGAGGTGG ACGGAGGAAT CAATCTGGAC ACGGCTCCTG CCGTAGTCAA AGCCGGTGCC AATATCCTGG TGGCCGGAGC GGCGGTATTT GCCTGCGCTG ACCCGGCCCG GGCAGTCCAA GAGCTCCGGG AAGCGGCCCA AGGCTATAAG GGTGATCCAA AGTGA
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Protein sequence | MIKIAPSILS ADFAHLGDQV ALVEKAGAEV LHIDVMDGHF VPNITIGPLV VKALRPYSQM RFDVHLMIEH PERFIEEFAK AGADHITVHL EATPHIHRAI QQIKGLGLTA GVSINPATPL DGIKYILDEL DMVLIMSVNP GFGGQKFIPA VLPKIEVLHR HLDQMQSSCE IEVDGGINLD TAPAVVKAGA NILVAGAAVF ACADPARAVQ ELREAAQGYK GDPK
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