Gene Dhaf_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3814 
Symbol 
ID7260835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4054158 
End bp4055396 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content53% 
IMG OID643563738 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_002460266 
Protein GI219669831 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000181016 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC AACGAGCGGT TATTACAGGA ATGGGTGTGG TATCCCCGGT TGGGAGTAAC 
CTGGAAACAT TCTGGAACAG CTTAATTACC GGACAATCAG GGATAGATTT TGTCACTCGT
TTTGATGTGG GGGATATGCC CACGAAAGTA GCGGGGGAGA TTAAGGATTT TGAGCCTACG
GATTGGCTGG ATCGTAAAGA AAGCCGCCAT ATGGATCGCT TTACCCAGTT GGCTATGGCT
GCGGCTAAAA TGGCCGTCCA GGATTCCGGG TTAAATCTGG ACCAGGTCAA TAAGGAAAGG
GCCAGCTGTA TTGTGGGAAC CGGAGTGGGC GGGGTCACCA CCCTGGAACA GCAGAAAGAA
GTCCTCATGA ATAAAGGGCC GGGAAGAATC AGCCCCTTCT TTATTCCTAT GCTGATCTCC
AATATGGCTG CCGGTCATAT TTCCCTTGAA TTCGGCCTTC AGGGCTCCAG CTTAAGTGTG
GCCACCGCCT GCGCCTCGGC TACCAATGCC ATCGGTGAGG CCATGCGCCT GATCGAGCAC
GGCTATGCCG ATGTAGTGCT TTGCGGCGGC ACGGAAGCCC CTATTGTACC TTTGGCCTTT
GCGGGTTTTT GCGCCATGAA AGCCATGTCC ACGGAGAAGG AAAATCCCCG GGAAGCCTGC
CGTCCTTTCG ACGCCAGAAG GTCGGGGTTT GTCATGGGTG AAGGAGCGGG AATCCTCGTT
CTGGAATCCC TGGAGCATGC CCAAAAGCGG CAGGCCAGGA TTTACGCTGA GCTTTCCGGA
TATGGCAGCA CCTGTGACGC CTATCATATC ACCTCTCCGG CGCCGGGAGG AGCAGGAGCC
ATCCAATCCA TGCAGGCGGC CTTGACAGGA GCTGAGGTGC GGCCGGAAGA AGTGGATTAT
ATCAACGCCC ATGGCACAGG AACCAATGCC AACGACTCGG CGGAGACGGC GGCGATTAAA
GCCCTCTTCG GGGAAGCGGC GCAAAAAGTG GCCATCAGCT CCACCAAGTC CATGACCGGG
CATCTCTTAG GAGCGGCAGG AGCTATCGAA GCCATCGCCT GCGCTTTAAC CATTAAGAAT
AGCATGATTC CACCCACCAT AAACTATGGA GAGCCTGACC CGGAATGCGA TTTGGATTAT
GTTCCCAATG CCGCCCGGCC AAAAGAAGTT CAAGTTGCTT TATCAAATAC CTTTGGTTTT
GGAGGACATA ATGCTACAAT TGTATTAAAA CGTTATTAG
 
Protein sequence
MEKQRAVITG MGVVSPVGSN LETFWNSLIT GQSGIDFVTR FDVGDMPTKV AGEIKDFEPT 
DWLDRKESRH MDRFTQLAMA AAKMAVQDSG LNLDQVNKER ASCIVGTGVG GVTTLEQQKE
VLMNKGPGRI SPFFIPMLIS NMAAGHISLE FGLQGSSLSV ATACASATNA IGEAMRLIEH
GYADVVLCGG TEAPIVPLAF AGFCAMKAMS TEKENPREAC RPFDARRSGF VMGEGAGILV
LESLEHAQKR QARIYAELSG YGSTCDAYHI TSPAPGGAGA IQSMQAALTG AEVRPEEVDY
INAHGTGTNA NDSAETAAIK ALFGEAAQKV AISSTKSMTG HLLGAAGAIE AIACALTIKN
SMIPPTINYG EPDPECDLDY VPNAARPKEV QVALSNTFGF GGHNATIVLK RY