Gene Dhaf_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3812 
Symbol 
ID7260833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4049760 
End bp4053356 
Gene Length3597 bp 
Protein Length1198 aa 
Translation table11 
GC content55% 
IMG OID643563736 
Productchromosome segregation protein SMC 
Protein accessionYP_002460264 
Protein GI219669829 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG CCGATACTCT CCCTGTTTTC TTGAAATCCA TTACAATCCA AGGGTTTAAG 
TCCTTTGCGG ACAAAGTGAA GCTGGAATTA GGGCAGGGCT TGAGTGTGGT AGTGGGGCCC
AATGGGAGCG GCAAAAGCAA TGTGGCCGAT GCCATCCGCT GGGTTCTGGG GGAACAGAGC
GCCAAAAACC TCAGGGGCAG CAAGATGGAG GATGTCATTT TCTCCGGCAG CAGTGTGCGG
CGCCCGGTGG GGATGGCCGA GGTTTCCTTA TTTTTTGATA ACTCCACGGG GATTTTTCCC
CTGGAGTATC AGGAAGTGAT CATCACCCGC AGAGTCTATC GGGACGGAGA GGGACAATAT
TTTATCAACC GCTCCTCCTG CCGCCTTAAG GATATCCATG AACTTTTTAT GGATACCGGT
GCGGGCAAAG AAGGGTTTTC CATTATTGGT CAAGGCCGGG TCGAGGAGAT TCTCAATCTG
CGCTCCGAAG AACGGCGCAC CTTGATCGAA GAAGCTTCAG GAATAACCAA ATACCGCATG
CGCAAACGGG AAGCACTTAA GCGTTTGGAT GAAACGGAAC ATAATTTAGA GCGGATCAGG
GATATCCTGG CCGAGATCGA AGGGCAATTA GGACCTTTGG AAGAGCAAGC CACCATAGCC
AGGGAAGCTG TGGAGCTGAC CACAGAACAA AAAGCCCTGG AGATCGAGAT GGTGGCCTTT
GATTTAAAAG AGGTGCGCCA TAAGCTGACT TCCTCCGTTC AGGAAACGGA AGAACTTCAG
TCGGCCATCG CCGCGGCAGT AGCGGATCTA AGCCAGAAGG AAAGCGGCAT CCTCAGCAAC
AAAGTGAAGC TCAATCTTCT GGATGAGCAG ATCCAGAAGC AGCAGGAAAC CACCTACCAA
TTGGATCAAG CAGTCAACCA AATCGTTCAG GAGTTGCGGC TCCGCCAGGA GCGGGAAGGC
TACCTCGGCG AGCAGATTAA TCGTGTCACC ACGGAGCTCT CCAATCATGA GGAGAAGGTT
CGCCAGAGTA CAGAACAGCT CAGAGCCTTA GAGGACAGAA AAGCCCTCTT ACATAAGACT
CTGGACCAGG CTAATCAGGC TTTGGCGGCG GATGAACAAC GCTTGGTCGA GGCTAAAGCC
AGGAATGGCT TAGAGGAAAT TGAAATCCTC AGGGGCAGTC TCTCCCATCT GCAGAGCAAG
CTGGCCGAGT CCAGCGCAGA ATTAAACCGC CTTACCCATC AGTTGGCTAC CCTGAATTCA
ACCCATGAGC AATTGATTAA AGAAAAAAAG GATAAAGAAG GAGCCCTGCT CTCTCATGAG
CAGCAGGAGG CCCAGGTTCA GGAGCAGCTT AAAACCCAGG AAGGGCTGCA GACGGATATC
CGGCTCCAGG CAGAGAAGGC CCAGCAGGAA AATGCTCAGT TCCGTGAGCA GAGCAAAGCA
GGGCAGAGGG AGCTCCAGGA ACTGAATCGG GACCTGGAGA AAAAATCAGC CCGCTATCAT
GCCCTGAAGA ACCTGGAAGA CTCCCTGGAA GGCTATCAAC GGGGTGTCCG GGAGCTGATG
CTGGCCAAGA AAAAAAACCA GCCTTCCTGC GGAGATCTCT GCGGCACCCT GGCGGATCTT
CTTCAGGTTG AAGAGCGTTA TGAGGTGGCC ATCGAGGTCG CCCTGGGGGC AGGTATTCAG
AATATCGTTA CCGCAACGGA ACGGGGTGCC AAGGAAGCCG TTCATTATCT GAAAAGCCAC
AATCTGGGTC GGGCCACTTT TTTACCCCTG GATGTGATTC AAGGGGGCAA AGCCGCTGTG
GCCAAAGAGG CGGCCAAGGA CCCCGGCTTC ATCGGCGTGG CGGTGGATCT TATCACCTTC
GCCGAAAAAT ACCGCAAGGC CTTTGAATCC CAACTGGGCA GAACCCTCAT CGTCACGGAT
ATGGAGGCGG CCACCCGGGT GGCCAGAGCC TCGGGCTATC GCGCCCGCAT CGTGACCCTG
GAGGGGGATC AGGTTCACCC GGGGGGCTCC CTGACCGGGG GCAGCCTGCA AAGAAAAGGC
TCCAACATCT TGGGACGTTC CCGGGAAATC CAGGAACTCC GGCAGGAGTG CGACGAAAGA
CGCACCCAGC AAAAGGAACT GGAGCTCAAA GCAGGGGCTC TCAGCATCCA AATCCAAAAA
GGTGAGGAAA ACCTTAAGCA TCTGATGGCT GAAGAGCAGG AGCTTAAATC CGCTCTGGCC
GTGTTAAGAA CTCAGGAGCT TAATCTCCGG GCCCAGGCCC AAAGGATTCG TGATGAAATA
ACCGCCGTAA CCATCCGTGT GGCCGGGATA GAGCAGGAAC GGGATGAGCT GCAAAGCCAT
AAGGCCCTGG AGGCAGAAGA GCAAAGCAAG CTTACAGACA GCATCCAAGA GGCTCAGGAA
GCCTTGGCCC GGCAGGAAGA AAAGAATCGC CAGGCCAGCC GGGAGATGGA ACAGCTTCAA
GAAAGACTGA CCCAAACCAA GGTGCAGGCG GCTAAGTGGG AGCAGGAGCT CAAGCAGGCT
GTGGAGCGCC TGGTCCAGGA TCAGGCCCTG CTGGGGGAGA ACAAGCATCT CCTGGAGCGC
AAGCGCAAGG ATTTGCAGGA TTTAGAAGAG AGCAAAGCCC GTCTGGCCTT CGAACAGGGA
GACTGGGAGA GCCGCCGCAG GGAAGCAGGA GAGCAGCAGC AGCAAGCCCA GGAAGTCCTC
ATCGCTTTGC GCAAAGAGCG GGAGGTTCTG TCCAAGGAGC TGATGGATCA GGAAGGCCTC
GCCCAAAAGA AAAGGCAGGA GCAGCAGACC CTGGAACAAA AGCTGCACAA CCTGGAGCTG
AAGACGGCCC GCTGGGATGC CGAATGGGAA ACCGGCTCCA AACGGTTACT GGAAGAATTC
GACCTGACTT GGGAAGAGGC TCAAGCCTAC CAAAGTGAAA GAAACCGTGC CGAGCTGGCG
GCCAGAGTCC AGGAGATTAA ACTGCGGATG GAGCTGCTGG GCCCTGTGAA CCAGGCGGCC
ATTGAAGAAT ATCCGAAGCT TCAGGAGCGC TTTGATTTTC TATCGGTGCA AAAGCAGGAT
CTGGAGGAGG CCAATGAATC CCTCCAGCAA CTCATCGCCG AACTGGATAA AACCATGTCG
GAACGTTTCG AAGAAGGATT TATAGCGGTC AACGAAGCCT TTAAAGTGGT CTTCAAGGAA
CTGTTCAACG GAGGCTATGC GGAACTTCGC TTAGTAGACC CGGCCAATCT TCTGGATACG
GGGGTAGAGA TCATCGCCCA GCCCCCGGGA AAAAAGCCCC AGCTGCTGTC TCTCCTTTCC
GGAGGAGAGC GTGCTCTGAC AGCCATCGGA CTGCTCTTCG CCCTGCTTAA GGTGAAGCCC
AGCCCCTTCT GTGTCCTTGA TGAAATCGAG GCTTCCCTGG ATGATGCCAA TGTCAGCCGC
TTTGCCCAAT ACATTCACCG CTTGGCAAAC TCCACCCAGT TCCTGGTCAT CTCGCACCGC
AAAGGAACCA TGGAAGCAGC CGATGTCCTC TATGGCATCA CCATGGAGGA GTCGGGTGTA
TCTAAGCTGC TCTCTGTTCA GTTGGAAGGC CAGGACAAGG ATACTAGGAT GGCTTGA
 
Protein sequence
MAKADTLPVF LKSITIQGFK SFADKVKLEL GQGLSVVVGP NGSGKSNVAD AIRWVLGEQS 
AKNLRGSKME DVIFSGSSVR RPVGMAEVSL FFDNSTGIFP LEYQEVIITR RVYRDGEGQY
FINRSSCRLK DIHELFMDTG AGKEGFSIIG QGRVEEILNL RSEERRTLIE EASGITKYRM
RKREALKRLD ETEHNLERIR DILAEIEGQL GPLEEQATIA REAVELTTEQ KALEIEMVAF
DLKEVRHKLT SSVQETEELQ SAIAAAVADL SQKESGILSN KVKLNLLDEQ IQKQQETTYQ
LDQAVNQIVQ ELRLRQEREG YLGEQINRVT TELSNHEEKV RQSTEQLRAL EDRKALLHKT
LDQANQALAA DEQRLVEAKA RNGLEEIEIL RGSLSHLQSK LAESSAELNR LTHQLATLNS
THEQLIKEKK DKEGALLSHE QQEAQVQEQL KTQEGLQTDI RLQAEKAQQE NAQFREQSKA
GQRELQELNR DLEKKSARYH ALKNLEDSLE GYQRGVRELM LAKKKNQPSC GDLCGTLADL
LQVEERYEVA IEVALGAGIQ NIVTATERGA KEAVHYLKSH NLGRATFLPL DVIQGGKAAV
AKEAAKDPGF IGVAVDLITF AEKYRKAFES QLGRTLIVTD MEAATRVARA SGYRARIVTL
EGDQVHPGGS LTGGSLQRKG SNILGRSREI QELRQECDER RTQQKELELK AGALSIQIQK
GEENLKHLMA EEQELKSALA VLRTQELNLR AQAQRIRDEI TAVTIRVAGI EQERDELQSH
KALEAEEQSK LTDSIQEAQE ALARQEEKNR QASREMEQLQ ERLTQTKVQA AKWEQELKQA
VERLVQDQAL LGENKHLLER KRKDLQDLEE SKARLAFEQG DWESRRREAG EQQQQAQEVL
IALRKEREVL SKELMDQEGL AQKKRQEQQT LEQKLHNLEL KTARWDAEWE TGSKRLLEEF
DLTWEEAQAY QSERNRAELA ARVQEIKLRM ELLGPVNQAA IEEYPKLQER FDFLSVQKQD
LEEANESLQQ LIAELDKTMS ERFEEGFIAV NEAFKVVFKE LFNGGYAELR LVDPANLLDT
GVEIIAQPPG KKPQLLSLLS GGERALTAIG LLFALLKVKP SPFCVLDEIE ASLDDANVSR
FAQYIHRLAN STQFLVISHR KGTMEAADVL YGITMEESGV SKLLSVQLEG QDKDTRMA