Gene Dhaf_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3804 
Symbol 
ID7260825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4040691 
End bp4041827 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content37% 
IMG OID643563728 
Productprotein of unknown function DUF214 
Protein accessionYP_002460256 
Protein GI219669821 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATAAAA TAATAACTTT ATTAAAACGG CAGTTCATAG CCCACACCGT TTCCATCATA 
TTTTTATTGA TAGGCTTTAT CGTATCCATA TTGCTTATAT CCATTGGAAC CAGTGCTGTA
CTTGGGTTAA AACAAGCCGC CATAATGAAA GAAAACGCCA CGCCGCAAAA TGCTTTGGCC
ATGACATATG CTTTTAGTAA AAAGTCCAGT TTTGACGATC ATTTAGAAAT AATTAAAAAT
ATCTCCGTGA ATTCCGGCGT TATGGTAGCG AACCACTCCC TTTATTTTAA CGAAGATCAA
TCCAAACACC CCTTAACCGC TATCTTTTTT CAAGAAGAAT CCAAATGGAC TTATCCGTAT
TACGATGGAA GATATTTAAA AACAAGTGAA ATAAATCAAG GAGCCAGCGT AATTTTAATC
GGTAAAAACC TGTTAGGGCT TACCCATAAG AAAGATGGAA TAAAGTACCT GGATATTGAG
GGCGAAGAGT ATGAAGTGAT TGGCTTAATC GGTGTAAAAA ATCAATATAC GACATGGGAT
TCCAGAATAT TGATGCCCCT TACGTCAGTC CCTGAGAGTA CCAGGAGCGA AATTGAAAGC
AGCGGCTGCA CTATGATCTT GTATAATGAT GAAAAACTGC CCATGGATGA TTTTAATACC
TTGAAGGATA AAATCCTTCA AGTGGATAAA GACGCCATGA TCACGGCTGA GGAATTAAAC
CCAGGCAGCG AAAAGATTAT CATTGATTTA TTTGCACAGA AGGATAGTTT GGTGATTTTT
ACTCTCTTGG TTTATGTAAT AGCCTTAATA AATCTGGTTA ATATCACATC CTATTGGATC
AATGACCGAA GATATGAAAT TGGGGTAAGA AAAGCTTTTG GACATACGAA CCTTCAGGTT
GCCATGATGT TATTCTCGGA AATGTTTCTC GTTTTATTGA CAGGCTGCAT TATCGCCTTG
GTTTTACATA TGCTTTTAAA CCAAATTTTA AGTAACATGC TGGATTATCC GTCAACTGTA
ACCTACGTTA ATTGGTTAAC GGCTATCATT TTCACAATGG CCTCGTCTCT TGCAGCAACA
ATCATTCCCA TCGTCAAATC TATGAAAATT CAACCCATTG AAATCATGAG AAAGTAA
 
Protein sequence
MYKIITLLKR QFIAHTVSII FLLIGFIVSI LLISIGTSAV LGLKQAAIMK ENATPQNALA 
MTYAFSKKSS FDDHLEIIKN ISVNSGVMVA NHSLYFNEDQ SKHPLTAIFF QEESKWTYPY
YDGRYLKTSE INQGASVILI GKNLLGLTHK KDGIKYLDIE GEEYEVIGLI GVKNQYTTWD
SRILMPLTSV PESTRSEIES SGCTMILYND EKLPMDDFNT LKDKILQVDK DAMITAEELN
PGSEKIIIDL FAQKDSLVIF TLLVYVIALI NLVNITSYWI NDRRYEIGVR KAFGHTNLQV
AMMLFSEMFL VLLTGCIIAL VLHMLLNQIL SNMLDYPSTV TYVNWLTAII FTMASSLAAT
IIPIVKSMKI QPIEIMRK