Gene Dhaf_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3802 
Symbol 
ID7260823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4038744 
End bp4039409 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content39% 
IMG OID643563726 
ProductABC transporter related 
Protein accessionYP_002460254 
Protein GI219669819 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA TTGAACTGAA AGAAATCTAT AAGATTTACG GCAAAAGCGA TTACCGGACT 
ATCGCGCTCA ATAATATAAA TCTGGCCATA GAAAAAGGAG ATTTTCTGGC GATTATGGGG
CCCTCCAGCT CGGGAAAATC CACCTTCTTA AATATTTTAG GCTGTATGGA TGTTCCTACA
AGCGGAGAGT ATTATTTAAA CGGAGTTCTA ATAAATTCGC AGTCCGACAG GGCGTTAAGC
AATATCCGAA ATCATACTGT CAGTTTTATT TTTCAGAATT TTGCTCTTCT CAAAGACTAC
AGCCTTTATG AAAATATTGA ATTGCCCCTT CTTCATCGGA AAATACCGTC TAAACAAAAA
AAGGAAAAAA TCATGCATTA TTCCTCAAAA CTTGGAATAA ACAGTATTCT TCGGAAAAAA
CCTCAGGAAA CATCGGGTGG CCAACAACAA CGGGCGGCCA TCGCCAGAGC ACTGGTGTGC
GAATCAGAAG TCATTTTGGC TGATGAGCCA ACCGGCGCGT TAGATCAAAA AACGGGAGAA
AATCTGCTGT TGCTGTTAAA ACAAATTAAT CAGGAAGGGA AAACAATTTT GATCGTGACC
CACGACAGCA AAACGGCAAA CTATGCGAAT AAGATAATAA CAATTAATGA CGGCGAAATT
GTTTGA
 
Protein sequence
MNIIELKEIY KIYGKSDYRT IALNNINLAI EKGDFLAIMG PSSSGKSTFL NILGCMDVPT 
SGEYYLNGVL INSQSDRALS NIRNHTVSFI FQNFALLKDY SLYENIELPL LHRKIPSKQK
KEKIMHYSSK LGINSILRKK PQETSGGQQQ RAAIARALVC ESEVILADEP TGALDQKTGE
NLLLLLKQIN QEGKTILIVT HDSKTANYAN KIITINDGEI V