| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3757 |
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| Symbol | trmD |
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| ID | 7260778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3992846 |
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| End bp | 3993637 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643563681 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002460209 |
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| Protein GI | 219669774 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00362572 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAGT TCACTGTATT AACCCTGTTT CCGGAGATGT TTGCCCCCGT TCATGAGAGT
ATTTTAAAAC GGGCTCAAGC AGCACAGCTC ATTGAGGTAA GTTTAATTAA TTTCCGGGAT
TACGCTGCCA GCAAGCATAA GAATGTGGAT GATGTTCCTT ATGGGGGAGG AGCGGGCATG
GTACTCAAAC CTGAGCCCCT CTTTGCGGCA CTGCGGGACT TGCCGCCCAG CCCTGGCCGG
CGGCGGATTG TGCTGCTTTC TCCTCAAGGG GAAGTGTTTC AACAGCGGAA GGCCGAAGAA
TGGAGCCGCT GGGATGAACT GGTCTTTATT TGCGGTCACT ATGAAGGCTT TGACGAACGC
ACCCGCAGTC TTGCTGATGA AGAAGTGTCT TTAGGGGATT TTGTTCTTAC CGGAGGAGAG
CTGGCAGCCA TGGTGATGAT GGATGCCGTA GCTCGTTTAT TGCCCGGTGT TCTGGGAGAA
AAAGCCTCCG CTGAGGAAGA TTCTCATAGC GGAGGGCTTT TGGAATACCC TCACTATACC
CGTCCCCCTG TATTTGAGGG GATGGAGGTA CCGGATGTTC TTTTATCCGG CCATCACCGG
CGTATTGAAG AGTGGCGCAG AAAGGAATCC CTGCGCCGTA CTTTCTTAAA GCGTCCTGAT
TTGTTCGCTA AGGTTGAATT TCAAGCGAGC GATTTCAATT TATTGGAAGA ACTGATTCAA
GAACATCCTG AGCTGGCACA AGAGCGCTCA CGCTGGGAAC ATTTAAGGCC TAAGCCCAAA
AAACGCCGAT AA
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| Protein sequence | MMKFTVLTLF PEMFAPVHES ILKRAQAAQL IEVSLINFRD YAASKHKNVD DVPYGGGAGM
VLKPEPLFAA LRDLPPSPGR RRIVLLSPQG EVFQQRKAEE WSRWDELVFI CGHYEGFDER
TRSLADEEVS LGDFVLTGGE LAAMVMMDAV ARLLPGVLGE KASAEEDSHS GGLLEYPHYT
RPPVFEGMEV PDVLLSGHHR RIEEWRRKES LRRTFLKRPD LFAKVEFQAS DFNLLEELIQ
EHPELAQERS RWEHLRPKPK KRR
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