| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3731 |
|---|
| Symbol | |
|---|
| ID | 7260752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3965947 |
|---|
| End bp | 3966903 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643563655 |
|---|
| Product | UbiA prenyltransferase |
|---|
| Protein accession | YP_002460183 |
|---|
| Protein GI | 219669748 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000383911 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGA TGGCCCGGTT GGAAACTTTA AAGGATAAAA AACCTGATTT TGACCCGCAA
AAGAAGAATA CTATGCAGGC AATTGCTCAA TTAGTTCGTC CACGACAATG GGTTAAGAAT
TCCTTTGTCT TCATCGGTCT CCTTTTTACT CAAAACCTTA ACCAACACCT GATTCTAAAG
GTCATCATTG CTGCGGTGGC CTTTTGTCTT GTTTCCAGCG CAGTCTATGT GATGAATGAT
TTTGTCGATC GAGATTATGA TCGGAATCAT CCGACTAAAT GTAAGCGTCC CCTTGCTTCA
AATCGGGTGA CCCTTTCTGC GGCAGGCTCG GTTTTCGTAC TGTTTCTGCT GGGGGGACTT
CTCTTGGGCT GGCATGTGTC AAAAATTGCT GCCGGAATTC TTGTTTTGTA TGTTGCCCAG
AATTTGGCTT ATACAAAGGG GCTTAAGCGG ATTGTGCTCA TCGATGTATT TATTATTGCC
CTGGGCTTTA TGATGAGGAT TCTCATGGGA ACCTGGGGGG TGGGAATTCC CCCTTCAGAG
TGGCTCTTAT TGTGTGGCTT TATGGTAGCT CTTTTTATGG GCTTCGGAAA GCGGTGTTCC
GAATTGAACG AATTGAGCGT GGATGCCGGA TTGCATCGGC CTGTTTTGGA ACGATACAGC
CCCGGATTGC TGAATCAATT GCTGGGGATT ACGGCCGGAG GGGTTATCTT TACCTACAGT
CTATATACTC TCGATTCGGC AACGGTGGCT CTTCATCATA CCACCAATCT CATTTATTCA
GTGCCCTTTG TCATCTATGG TATTTTCCGC TATCTTTATC TTATTCATAA AGGTGAGGCC
GGAGATCCAT CCAAACTTGT CACTAAAGAC AGGCATCTCA TCGCGGTCGT TATGCTTTGG
GTTCTCTATG TTTTGTGGAC TCTTAAGCTT CATGATTTAG TATTAGGGGT GTTGTGA
|
|---|
| Protein sequence | MSLMARLETL KDKKPDFDPQ KKNTMQAIAQ LVRPRQWVKN SFVFIGLLFT QNLNQHLILK
VIIAAVAFCL VSSAVYVMND FVDRDYDRNH PTKCKRPLAS NRVTLSAAGS VFVLFLLGGL
LLGWHVSKIA AGILVLYVAQ NLAYTKGLKR IVLIDVFIIA LGFMMRILMG TWGVGIPPSE
WLLLCGFMVA LFMGFGKRCS ELNELSVDAG LHRPVLERYS PGLLNQLLGI TAGGVIFTYS
LYTLDSATVA LHHTTNLIYS VPFVIYGIFR YLYLIHKGEA GDPSKLVTKD RHLIAVVMLW
VLYVLWTLKL HDLVLGVL
|
|---|
| |