Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3717 |
Symbol | |
ID | 7260738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3949908 |
End bp | 3951998 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563641 |
Product | DNA topoisomerase I |
Protein accession | YP_002460169 |
Protein GI | 219669734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000589001 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA CACTCGTGAT CGTTGAATCT CCGGCTAAGG CTAAATCCAT AAGCAAATTT TTAAGCAATA ATTATACGGT CAAAGCGTCC ATGGGACATT TGCGGGATTT GCCCAAAAGC CAAATGGGAG TTGACGTAGA CAATGACTTC GAACCCAAAT ATATAGCGAT TCGTGGACGC GGGGATTTAA TTAAAGAGCT GCGGGCCGCC GCGAAGACCG CTAATAAAAT TCTCCTGGCC TCTGACCCCG ACCGCGAGGG GGAAGCTATT GCCTGGCATT TAGGCCATCT GCTCGGTTTG GATCTAGCGG AGAAGTGCCG CATTGAATTC CATGAGATTA CCAAACCGGC TATTACGGCT GCCATTAAAC ACCCCCGTCA GATCGATTCC AGTAAAGTAG ATGCCCAACA AGCCCGTCGC GTCTTAGATC GTTTGGTGGG GTACCAGCTG AGTCCGTTCC TTTGGAGAAA AGTGAAAAAG GGCTTAAGTG CCGGCCGGGT TCAATCGGTT GCTGTTCGTT TAATTTGCGA TCGGGAAGAA GAGATTCGGG AGTTCATCCC GGAAGAATAC TGGACGTTGA CCGCTTCCTT GAAAAGTGAG GGAGGGGTAT TTTCGGCTAA GCTCGCCAGG AAAGGGGAGC ACAGGATTGC CATTGCTTCG GAAGAAGAGA TGCAGAAGGT TCTCCAAGAG CTGGCAGATC AGACCTACCG GGTTAAAGAT GTTCGCACCA AGGAGAAAAA GAAACAACCT TCACCCCCCT TTACCACCAG CAGCCTGCAA CAGGAAGCTC ATCGCAAGCT GAATATGTCA CCGAAAAGGA CCATGATGCT GGCCCAGCAG CTCTATGAAG GGATCGAGCT GGGTAAGGCG GGAGGCATTG GTTTAATTAC CTATATGCGT ACCGACTCCG TGAGAATTTC AGAGACTGCC CAAGAAGAAG CCAAGGAGTT TATTGCCGAG CACTATGGGG CGGATTATTA TCCTCCGGAA CCCCGTCAAT TTAAAAGCAA AGGCCGGGCC CAAGAAGCCC ATGAGGCCAT TCGCCCTACT TCCATATTGA GAACACCGGA CTCCGTGAAG GAGTTCTTGT CCAGGGATCA ACTGCGTCTT TACCGGTTAG TCTGGGAGCG TTTCCTGGCC AGCCAAATGA GTGCGGCTGT CCTTGATACC TTAACTGTTG AAGTGGAGGC CGGGGAGTAC TTATTCCGTG CTAACGCTTC CACCGTGCGT TTCCCCGGGT ATCTTGCCGT TTATGAAGAT GGACAGGATG AGAATGACGA CCAGGAAGAA GGGACCCTCG CGGCCAATAT TCAACCTGAT GAGAGTCTCA ATGTCCTTCA GCTCCAGGAG AAGCAGCATT TTACAGAACC ACCTCCCAAG TATACGGAAG CCTCTTTGGT ACGCAAAATG GAGGAGGAGG GAATCGGCCG GCCCAGTACC TATGCTCCGA CTATCGAAAC CATTCAATCC CGGGGCTATG TGGCGAAGGA AGGGAAACAG CTTTCTCCCA CTGAATTGGG AGAAATCGTC GTCTCTATTC TCAAAGAGTA TTTCCCGGAG ATCGTGGATT TGGAATTCAC GGCCAATATG GAGAAAAGGC TGGATGATAT TGAAGAAGGA GCTTTACCCT GGAAAGCCGT CATTCGGGAT TTCTATGGCC CCTTTGCGGA ATCCATAGAG GAAGCGGATC AGGTGATGGG TAAGGTACAA ATCGAAGATA AGGTATCGGA AGAAATCTGT GAAAACTGCG GTCGCAATAT GGTGATCAAA ATGGGACGCT ATGGTAAGTT TCTGGCCTGT CCGGGCTTCC CTGAATGCCG TAACACCAAA CCTCTGCTGG AAGAGGTGGG AAGGCCCTGT CCTGACTGCG GGAACCCGCT GGTGATTCGG CGCAGCAAGA AGGGCAGAAA GTTCTATGGC TGCAGCACTT ACCCGGAATG TGAGTTTGTA TCATGGGAGT TGCCGGCGCC GGAGCCCTGT CCGAAATGCG GAGGGTTGAT GGTGGTTAAG ACTTCGAAGC AAGGGCAAAA ATATGTCTGC ACCAATTCCG AATGCCGTTT TGACAAGCAA GTAGAGGAGC AAGCAGAATA A
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Protein sequence | MAKTLVIVES PAKAKSISKF LSNNYTVKAS MGHLRDLPKS QMGVDVDNDF EPKYIAIRGR GDLIKELRAA AKTANKILLA SDPDREGEAI AWHLGHLLGL DLAEKCRIEF HEITKPAITA AIKHPRQIDS SKVDAQQARR VLDRLVGYQL SPFLWRKVKK GLSAGRVQSV AVRLICDREE EIREFIPEEY WTLTASLKSE GGVFSAKLAR KGEHRIAIAS EEEMQKVLQE LADQTYRVKD VRTKEKKKQP SPPFTTSSLQ QEAHRKLNMS PKRTMMLAQQ LYEGIELGKA GGIGLITYMR TDSVRISETA QEEAKEFIAE HYGADYYPPE PRQFKSKGRA QEAHEAIRPT SILRTPDSVK EFLSRDQLRL YRLVWERFLA SQMSAAVLDT LTVEVEAGEY LFRANASTVR FPGYLAVYED GQDENDDQEE GTLAANIQPD ESLNVLQLQE KQHFTEPPPK YTEASLVRKM EEEGIGRPST YAPTIETIQS RGYVAKEGKQ LSPTELGEIV VSILKEYFPE IVDLEFTANM EKRLDDIEEG ALPWKAVIRD FYGPFAESIE EADQVMGKVQ IEDKVSEEIC ENCGRNMVIK MGRYGKFLAC PGFPECRNTK PLLEEVGRPC PDCGNPLVIR RSKKGRKFYG CSTYPECEFV SWELPAPEPC PKCGGLMVVK TSKQGQKYVC TNSECRFDKQ VEEQAE
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