| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3716 |
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| Symbol | |
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| ID | 7260737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3948593 |
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| End bp | 3949906 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643563640 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_002460168 |
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| Protein GI | 219669733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.445131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCCA TTAAAGTGAT CGGAGCAGGT CTGGCCGGGG CGGAAGCCGC TTGGCAGATT
GCCCGGCAAG GAATAGAAGT TGAGCTTTAT GAGATGAGGC CGGTGCAAAT GACACCGGCC
CACCATACCG GCCATTTTGC CGAATTGGTC TGCAGCAACT CCCTTAAAGG AGCAGGGTTG
GATAATGCGG CGGGGCTGTT GAAAGAAGAG ATGCGCCGGC TGGATTCATT GCTCATGAGA
GTGGCGGACC AGTATGCCGT GCCGGCAGGA GGCGCTTTAG CTGTTGATCG CGAGCAGTTT
TCTCAGGAAA TAACCAAATT GCTCCAAGAG CACCCCTTGA TCCAGGTTCA CCGGGAAGAA
GTTAAGTCCC TTCCCCAAGC GGGTATTGCT GTGATCGCCA CAGGGCCGCT GACCGCGGAG
GACTTAGCTG GGGAGATTCA GCAGGTGACA GGTGAGGATG CCCTTGCTTT TTATGATGCC
GCAGCCCCCA TCGTTACTTT GGAATCGATT GATCTGGAAA AAGCCTTCTG GGCTTCGCGT
TATGATAAGG GGGACCCTGA TTACCTGAAC TGCCCCATGA CTGAGGAAGA GTATAAGCGG
TTTTATCATG AGCTGCTTAA AGCCGAGACA GCTGAAGTGA AAGGCTTTGA AAAAGGGAAA
GTCTTCGAAG GCTGTATGCC TGTGGAAGTC ATGGCAGCCC GGGGAGAGCA AACCCTGACT
TTTGGCCCCC TGAAACCTGT CGGTCTTATT GATGCACGGA CAGGCCAACG CTCCTATGCC
GTTGTCCAAC TCCGCAAAGA AAACCGGGCG GGGACCCTCT TTAACCTGGT GGGATTCCAA
ACCCATCTCA AATGGGGAGA GCAACAGCGG GTTTTCCGTC TCATCCCGGG CTTGGAAAAC
GCTGAATTCG TCCGTTTCGG AGTCATGCAC CGCAATACCT TCTTAAACGC CCCTAAGGTA
TTAAAAGCCG ACTACAGCCT TCAGAAAACA CCGCAGCTCT TTTTTGCCGG TCAAATCACC
GGAGTGGAAG GGTATGTGGA ATCCACGGCC AGCGGCTTAG TGGCAGGTCT CAATGCTGTG
CGACGCCTTA AGAATCTGCC CACCCTCATT TTCCCCCAGG AAACAGCTCT GGGTGCTTTA
GCCCGTCACT TAGAAGGATC TCCCAGTGTG GATTTTCAGC CGATGAGCAT CAACTACGGC
CTCCTTCCCC CGCTGGAAGT CCGTATCAAA GCGAAAAAGG AGAAAAACGC CAAAATCTCC
GCCCGGGCGT TGGCGAGGCT GGAGGAGTTT AAAGCCGCAG AGGGACTGGA TTAA
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| Protein sequence | MSAIKVIGAG LAGAEAAWQI ARQGIEVELY EMRPVQMTPA HHTGHFAELV CSNSLKGAGL
DNAAGLLKEE MRRLDSLLMR VADQYAVPAG GALAVDREQF SQEITKLLQE HPLIQVHREE
VKSLPQAGIA VIATGPLTAE DLAGEIQQVT GEDALAFYDA AAPIVTLESI DLEKAFWASR
YDKGDPDYLN CPMTEEEYKR FYHELLKAET AEVKGFEKGK VFEGCMPVEV MAARGEQTLT
FGPLKPVGLI DARTGQRSYA VVQLRKENRA GTLFNLVGFQ THLKWGEQQR VFRLIPGLEN
AEFVRFGVMH RNTFLNAPKV LKADYSLQKT PQLFFAGQIT GVEGYVESTA SGLVAGLNAV
RRLKNLPTLI FPQETALGAL ARHLEGSPSV DFQPMSINYG LLPPLEVRIK AKKEKNAKIS
ARALARLEEF KAAEGLD
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