Gene Dhaf_3708 details

Gene Information

• Locus tag: Dhaf_3708
• Symbol: tsf
• ID: 7260729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 3939854
• End bp: 3940507
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643563632
• Product: elongation factor Ts
• Protein accession: YP_002460160
• Protein GI: 219669725
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0003434
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAG TAACTGCAGC TCAAGTAAAA GAGCTCCGTG AACGTACCGG AGCAGGAATG 
ATGGATTGTA AAAAGGCTCT TAATGAAGTC GGTGGCAATA TGGATAAAGC GATTGATTTC 
CTTCGTGAAA AAGGTCTCGC TGCTGCAGCC AAAAAAGAAG GACGCATCGC GGCTGAGGGG 
ATCGTTGAAG CTTATATTCA TGGCGGCGGA AGAATTGGCG TCATGCTTGA GCTTAACTGC 
GAAACAGACT TCGTGGCCAA TACGGATGGT TTCAAACAAT TTGCCAGAGA TATTGCTCTA 
CAAATTGCTG CGGCCAAGCC CCGCTACCTT GCCAAAGCCG ATGTTCCTGA AGAAGAGCTG 
GAACACGAAA AGAATATCCT TAGAGCTCAG GCTTTAAATG AAGGAAAACC TGAGAAGATC 
GTTGATAAAA TGGTCGAAGG AAGGATCTCT AAATTCTATA AAGAAGTATG TTTGCTTGAA 
CAAGAATTTG TTAAAGATCC GGATAAGACG ATTAATGATC TTGTGCTTGA AAAAACGGCA 
AAGATCGGGG AGCGTATCGT TATCCGCCGC TTCACCCGCT ATGAAATGGG CGAAGGTATC 
GAGAAACGCG AAGAAGATTT TGCTGCAGAA GTTATGAAAG AAATGAACCG CTAA 

 

Protein sequence

MAEVTAAQVK ELRERTGAGM MDCKKALNEV GGNMDKAIDF LREKGLAAAA KKEGRIAAEG 
IVEAYIHGGG RIGVMLELNC ETDFVANTDG FKQFARDIAL QIAAAKPRYL AKADVPEEEL 
EHEKNILRAQ ALNEGKPEKI VDKMVEGRIS KFYKEVCLLE QEFVKDPDKT INDLVLEKTA 
KIGERIVIRR FTRYEMGEGI EKREEDFAAE VMKEMNR