| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3705 |
|---|
| Symbol | |
|---|
| ID | 7260726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3937609 |
|---|
| End bp | 3938379 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643563629 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_002460157 |
|---|
| Protein GI | 219669722 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.153678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCATA GATTTTGGGA CAAAAAAGAG CAAAGCAAAA CCTTGGCCGA TCAGCTGGAT
AAGAACAATT TACCCCGGCA TATCGCGATC ATCATGGATG GGAACGGCCG CTGGGCTCAA
AAACGTGGCT TACCCCGAAC TGTAGGTCAT AAGGCTGGTG TTGAAGCACT GAGGGATATC
GTCAAAGCTT GTTCAAATCT TGGCATTGAG GCCTTAACGG TTTATGCTTT CTCCACCGAA
AATTGGAGTA GGCCTAAAGA AGAAGTCAAT ATTCTTATGA ATCTATTGAT CGATTATTTA
CGGCGTGAGC TGGATGAACT CCATGATAAT AAAGTGCGTG TACAGATGAT TGGCAATATG
GAGCAGCTCC CCCTGGAAGC TCAGAGGGAA TTAAAGCGCT CTATTAAGAA AACAGTGAAT
AATGGGGGAC TTATTCTCAA TTTAGCCCTA AATTACGGTG GGCGTGCTGA AATTACTTGT
GCCGTACGGC AACTCTGTGA AAAAGTCTTG AAAAAGGAAC TTACACCTGA GGAAATCACG
GGTGAACTGA TCTCACAGCA TTTGTTTACT TCAGGATTAT CTGATCCGGA TTTGCTCATT
CGAACTTCAG GTGAATTGCG TGTAAGTAAT TTTTTATTAT GGCAGATTGC TTATACCGAG
ATTATTGTCA CAGAATGCTT GTGGCCTGAT TTTAGTCCGG ATCAACTGGT TGAAGCGCTG
CTGGAATTTC AGAAGCGGGA GCGCCGTTTC GGCGGGTTGA ACAAGCGGTA A
|
|---|
| Protein sequence | MWHRFWDKKE QSKTLADQLD KNNLPRHIAI IMDGNGRWAQ KRGLPRTVGH KAGVEALRDI
VKACSNLGIE ALTVYAFSTE NWSRPKEEVN ILMNLLIDYL RRELDELHDN KVRVQMIGNM
EQLPLEAQRE LKRSIKKTVN NGGLILNLAL NYGGRAEITC AVRQLCEKVL KKELTPEEIT
GELISQHLFT SGLSDPDLLI RTSGELRVSN FLLWQIAYTE IIVTECLWPD FSPDQLVEAL
LEFQKRERRF GGLNKR
|
|---|
| |