| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3704 |
|---|
| Symbol | |
|---|
| ID | 7260725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3936816 |
|---|
| End bp | 3937598 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643563628 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_002460156 |
|---|
| Protein GI | 219669721 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0101996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACAA GAACACTAAG CGCTTTGGTT TTAGTCCCTG TTTTACTGGG ATTAACATAT
TTGGGAGGGG TATATACTGC CTTACTCGTG ACGACGGTTT CCCTCATAGC GCTTAAGGAA
GCTCTGGCCA TTGGTCAAAA ATTGGGATTT AAAGCATGGA CGATAAGTTC CGGTATCTTT
TCTATGCTAT GGCTAGTGCT GATTTTTGCT GGTGAAATCC AGTGGAATTT TCCTTTAATG
ATCGCCTGGC TTCTGTTTGC TATGGGAAGA GCGGCTTTGG GGTATCCTAA AGTTAGCTTG
GGGGAAGCGG GATATAATTG CTTTGCTCCC ATTTATACGG TGGTGCTGTT TTCTCACCTC
TATCTGATCC GGGGATTTTC CGAAGGAATA GCTTGGGGTA TCCTTACCTT TATTTTGGTA
TGGGCAACGG ACACCTTTGC ATACCTTATA GGGAGAGTTA TGGGGAAGCA TTTACTGGCC
CCTCGGGTCA GTCCCAAAAA GACCATAGAG GGTTCCGTAG GGGGGCTGGT TTTTTGCATT
TTAAGCGGTA TCCTGGCTTG GAAGATGATC GGCGGCGCTC CCTTGGCAGG CTACATTGCT
TTAAGCGGCA TTGTAGCTAT CAGTGCTCAG ATTGGCGATC TGTTTGAATC CGCCCTGAAA
CGCAGTGTCA ATATTAAGGA TTCGGGGAAT GTTATACCGG GACATGGGGG AATCCTCGAC
CGCTTTGACA GTCTTTTGTT TGTGATACCG ATCATGTATT ATTGGGTACT AATTGTGGGG
TGA
|
|---|
| Protein sequence | MLTRTLSALV LVPVLLGLTY LGGVYTALLV TTVSLIALKE ALAIGQKLGF KAWTISSGIF
SMLWLVLIFA GEIQWNFPLM IAWLLFAMGR AALGYPKVSL GEAGYNCFAP IYTVVLFSHL
YLIRGFSEGI AWGILTFILV WATDTFAYLI GRVMGKHLLA PRVSPKKTIE GSVGGLVFCI
LSGILAWKMI GGAPLAGYIA LSGIVAISAQ IGDLFESALK RSVNIKDSGN VIPGHGGILD
RFDSLLFVIP IMYYWVLIVG
|
|---|
| |