Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3700 |
Symbol | |
ID | 7260721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3932245 |
End bp | 3933339 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643563624 |
Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
Protein accession | YP_002460152 |
Protein GI | 219669717 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000251734 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCGTA AGCTGACGAA AACAGTGCGA ATTGGCGATG TAATCATAGG GGGAGGCAGT CCCATCGTCG TCCAATCCAT GACCAATACA GATACCCGGG ATATCCCCGC TACCCTGGCT CAGATTCAAG CTTTGGCCCG GGCGGGGTGT GAGGTGGTGC GGCTGGCCGT GCTGGATCGG GAAGCAGGCT ATGCTCTCGG GGAGATCGCC TTGAAGAGCG AACTGCCTGT TATTGCCGAC ATCCATTTTG ATTATCAGCT GGCTTTGCTG GCCATCGAAC AAGGCGTGCA CGGGCTAAGA CTGAATCCGG GCAATATCGG TGCCCGCTGG AAGGTGCAAG AGGTGGTCCG GGCTTGCAAA GAAAGAGAGA TACCCATACG AATCGGGGTC AATGCCGGCT CATTGGAAAA AGAAATTCTG GAAAAATATC AGGGAGTTAC TCCTGAAGGC ATGGTGGAAA GTGCTTTAGG GCATATCCAC TTACTTGAAG AAGAAGGTTA TGATAAAATC AAAGTCTCTT TAAAAGCTTC CCATGTTCCG CTGATGCTGG CGGCTTACCG CAAGATGTCG GCAAGGGTGG ATTACCCCCT CCATATAGGA GTCACTGAGG CAGGAACGGT ACGTTCCGGA GTGGTAAAAT CTGCGGTAGG TATCGGCAGT CTCTTAGCCG AAGGGATAGG AGATACCCTG CGCGTATCTC TCACCGGAGA TCCTGTTCAG GAGATTCCTG TAGCCCTGGA AATTTTAAAA GTTCTCGGGT TAAGGAACCG GGGAGTGGAG CTGATCAGCT GCCCTACCTG CGGCCGCACT CAGGTGAATC TGGCTGAACT GGCAGAGAAG GTGGAGGACA AGCTTTCCCA TCTGCCCCCT TTGGATCGGC CCTTGAAAGT TGCCGTGATG GGCTGCGCAG TCAACGGACC TGGAGAAGCC CGGGAAGCAG ATTTTGGTAT TGCCGGTGGC AAAGGCATGG GCTTGCTCTT TAAAAAAGGG GAGATTGTCG CCCGTTTATC GGAAGAAGAA CTATTGCCCG CTTTACTTGC GGAAATTGAA AATTATGTGA AACAGTATGG AAGGGAGCAG CATTCATGCG TGTAA
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Protein sequence | MERKLTKTVR IGDVIIGGGS PIVVQSMTNT DTRDIPATLA QIQALARAGC EVVRLAVLDR EAGYALGEIA LKSELPVIAD IHFDYQLALL AIEQGVHGLR LNPGNIGARW KVQEVVRACK EREIPIRIGV NAGSLEKEIL EKYQGVTPEG MVESALGHIH LLEEEGYDKI KVSLKASHVP LMLAAYRKMS ARVDYPLHIG VTEAGTVRSG VVKSAVGIGS LLAEGIGDTL RVSLTGDPVQ EIPVALEILK VLGLRNRGVE LISCPTCGRT QVNLAELAEK VEDKLSHLPP LDRPLKVAVM GCAVNGPGEA READFGIAGG KGMGLLFKKG EIVARLSEEE LLPALLAEIE NYVKQYGREQ HSCV
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