| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3673 |
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| Symbol | |
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| ID | 7260694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3907856 |
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| End bp | 3908740 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643563598 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002460126 |
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| Protein GI | 219669691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0760058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGGAG TCATTAATGT ACTCAAACCC CCAGGGATGA CTTCTTCTGA TGTGGTCGTT
CGCTTAAGAA GAATATTGAA CACCCGGAAA ATTGGGCATA CGGGAACCTT GGATCCCGAG
GTTACGGGGG TATTGCCCAT TTGCGTCGGT AAAGCAACCC GCTTGGCTGA ATATATCACC
AATCAGGGAA AATCCTACCG TTGTGAGATG ATTTTTGGCA TAACGACAGA CACCCAGGAT
GCTTCCGGAG AGATTCTCCA CAAGGAGCCG GCTCAGGTGA GTGCTGAGGA TTTTCAACGG
CTCATTCCCC AGTATCTTGG TTCCATCCGG CAGATTCCAC CTATGTTCTC GGCGGTAAAA
CATCAAGGGA AACGTCTTTA TGAATTAGCC CGTCAGGGTC TGGAAGTGGA AAGAACATCC
CGGGAAATAC ACATCGATCA TTTGCAGCTT ATGGAATGGA TTGCAGGTGA ATACCCTAAG
GCGATTTTTG AAGTGGATTG TTCAAAGGGC ACCTACATAC GGACATTGTG CCATGATATG
GGGCAGACTT TAGGGTGCGG GGCACATATG TCAGCGCTGA TCCGCCTCCG TTCCGGACCC
TTTCATATTC AGGAGAGTCT ATCCCTGGAG ACGATTCAAA ACTTTATGGA GCAGGATGAT
TATTCATTCC TGATTCCTTA CATCCAAGTA TTGGACTTAC CCCGGGTGTC CTTGTCTCCG
CAAAGAGCGT TGGCCTTTCG CAATGGACTT TCGACAGCGA AAAGTCAAAT TGAGGTCGGG
GCTGAGATAG GTGAGGGGTG CGAAGTTCAA GTCTTTAGTG AGGGAAATTT TTTAGGTATA
GGAATTTGGA GAGAGCAGGC CCTCTGTCCT TACAAAGTTT TTTAA
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| Protein sequence | MDGVINVLKP PGMTSSDVVV RLRRILNTRK IGHTGTLDPE VTGVLPICVG KATRLAEYIT
NQGKSYRCEM IFGITTDTQD ASGEILHKEP AQVSAEDFQR LIPQYLGSIR QIPPMFSAVK
HQGKRLYELA RQGLEVERTS REIHIDHLQL MEWIAGEYPK AIFEVDCSKG TYIRTLCHDM
GQTLGCGAHM SALIRLRSGP FHIQESLSLE TIQNFMEQDD YSFLIPYIQV LDLPRVSLSP
QRALAFRNGL STAKSQIEVG AEIGEGCEVQ VFSEGNFLGI GIWREQALCP YKVF
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