| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3670 |
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| Symbol | |
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| ID | 7260691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3904034 |
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| End bp | 3906205 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643563595 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002460123 |
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| Protein GI | 219669688 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.443696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACAGG AAGTATTAGA ACGTTCGATC CAGGTCGGCG GCAGGACGAT GACCTTCCAA
ACCGGGAAAA TAGGTAAGCA AGCGGGCGGT GCCATTTTCT GCCGGTATGG GGATACCGTT
GTTTCAGCAT TTGCTACTGG AAGTGCTCAA CCAAGGGAAG GTATTGACTT TTTTCCGTTG
ACCGTTGAAT TTGAAGAGAG ACTCTATGCC GCCGGGAAAA TTCCGGGAGG CTTTATTAAG
CGGGAGGGGC GCCCCAGTGA GAAGGCGATT CTGTCTGCCC GCCTCATCGA CCGGCCGATT
CGGCCTCTAT TCCCCGAAGG CTATCGCAAT GATGTACAAG TCGTTGCTCA GGTAATGTCG
GTCGATCAGG ATTGTGCCTC CGACATTACC GGTATTAACG CAGCCTCGGC AGCCTTGACG
ATTTCCAATG TTCCCTTCGA AGGACCGGTA GCTGCTGTGA CCGTGGGTTT AATCGGGGAT
GAATTTATTA TTAACCCCAC CGTTGAACAG TCCGAAAAAA GCGTCATGCA TCTTACCGTC
GCCGGTACAA AGGATGCGGT AATGATGGTG GAAGCCGGTG CCCAAGAGGT ACCGGAAGCT
CAAATGCTGG AAGCCATTAT GTTTGGTCAC CGTGAGATTC AACGTATTGC TGAGTTTATC
GAGAACTATC GCCTCGAAGC TCTGGAAAGA AATTTAGCCA AACCCAAACA AGAAGTTGTG
ATGAAGCAGA TGCCGGAAGA GATCGTCCAG GCGGTCAAAG CATTTGCCTA TGATAAAATG
GATCAGGCAG TTCGCACCGA AGAAAAGAAA GCAAGGGAAG AAGCCATCCG GCAAGTGAAG
GAAGAGGCCT TGGCTCATTT CGCGGAGCAA TACCCTGAAG ACCTGAAAAC CATTGATAAG
ATTCTGGAAG ATTTCGTACA TAAGATTGTG CGGCGTTTGA TTACTGTAGA GCATATTCGT
CCCGATGGAC GTGCTTTAGA CGAAATCCGT CCCATCAGTG TCGAAGTCGG AATCTTACCC
AGAACTCATG GTACCGGTCT GTTTACCCGG GGGCAAACTC AGGTACTCAC GGTGGCCACT
CTGGGAGCCG TTGGTGATGA ACAGATTCTT GACGGGTTAG GCCTTGAAGA GTCCAAGCGC
TACATGCACC ACTATAATTT CCCGCCTTAC AGTGTAGGGG AAACCCGTCC TATGCGCGGA
CCGGGTCGTC GGGAAATTGG CCACGGAGCT CTGGCTGAAC GGGCCCTTCT CCCTGTTATC
CCTAATGAAA ACGATTTCCC CTATACCATT CGTCTGGTCT CGGAGGTTCT TGAATCCAAT
GGTTCCAGCT CGATGGCCTC AGTGTGCGGC AGCACTCTTT CCTTGATGGA TGCCGGAGTG
CCTGTTAAAT CTCCTGTGGC CGGAATAGCT ATGGGCTTGA TCAGCGAGGA GAATCATATC
GCCATTCTTT CCGACATTCA AGGAATGGAA GATCATGATG GAGATATGGA TTTCAAAGTG
GCAGGAACCA GTCAAGGTGT GACAGCCTTG CAGATGGATA TAAAAATCAA AGGGGTATCC
CGGGAAATCC TGGAAAGAGC CCTTACTCAA GCGAAAGAAG GACGCCTGTT TATTCTTGAT
AAAATGCTCT CTGTGATTGA AAAACCACGA CCGGAGCTTT CACCCTTTGC GCCGAGAATT
ATTACGGCAT CCATTCACCC GGATAAGATC CGTGAGGTGA TTGGACCTGG CGGTAAGACC
ATTAAGAAGA TCATTGATGA AACCGGTGTC AAGATCGATA TCGAAGATGA TGGCCGGGTC
TTTATATCCG CAGTGGATGG AGAAGCCGGG GAGAACGCCC TTAAGATCAT CCAAGCCCTT
ACCCAAGAGG TGGAAGTAGG CCGTATTTAT AATGGCCGGG TAACCCGGAT TATGGACTTC
GGAGCCTTTG TAGAAGTTAT TCCCGGTGTG CTGGGATTAA GCGGCAAAGA AGGGCTGGTT
CATATTTCCC AACTGGCCCA CGGACGGGTT GAGAAAGTAG AAGATGTGGT GAAACTGGGA
GACGAAATCC TGGTTAAAGC GACAGGCATC GATAAGCAAG GGCGCTTGAA CCTTTCCCGG
AAAGAGGCAC TTCCCAACCC CAACCCTAAT CCCAATGGAA GCACAGCCAA TAAAAATCCC
AGGAATAGTT AA
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| Protein sequence | MTQEVLERSI QVGGRTMTFQ TGKIGKQAGG AIFCRYGDTV VSAFATGSAQ PREGIDFFPL
TVEFEERLYA AGKIPGGFIK REGRPSEKAI LSARLIDRPI RPLFPEGYRN DVQVVAQVMS
VDQDCASDIT GINAASAALT ISNVPFEGPV AAVTVGLIGD EFIINPTVEQ SEKSVMHLTV
AGTKDAVMMV EAGAQEVPEA QMLEAIMFGH REIQRIAEFI ENYRLEALER NLAKPKQEVV
MKQMPEEIVQ AVKAFAYDKM DQAVRTEEKK AREEAIRQVK EEALAHFAEQ YPEDLKTIDK
ILEDFVHKIV RRLITVEHIR PDGRALDEIR PISVEVGILP RTHGTGLFTR GQTQVLTVAT
LGAVGDEQIL DGLGLEESKR YMHHYNFPPY SVGETRPMRG PGRREIGHGA LAERALLPVI
PNENDFPYTI RLVSEVLESN GSSSMASVCG STLSLMDAGV PVKSPVAGIA MGLISEENHI
AILSDIQGME DHDGDMDFKV AGTSQGVTAL QMDIKIKGVS REILERALTQ AKEGRLFILD
KMLSVIEKPR PELSPFAPRI ITASIHPDKI REVIGPGGKT IKKIIDETGV KIDIEDDGRV
FISAVDGEAG ENALKIIQAL TQEVEVGRIY NGRVTRIMDF GAFVEVIPGV LGLSGKEGLV
HISQLAHGRV EKVEDVVKLG DEILVKATGI DKQGRLNLSR KEALPNPNPN PNGSTANKNP
RNS
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