Gene Dhaf_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3660 
Symbol 
ID7260681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3895987 
End bp3896976 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content45% 
IMG OID643563585 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002460113 
Protein GI219669678 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.487501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAATG TTGCAATTGT TGGAGCTACA GGTGCGGTTG GACAAGAGTT CTTAAAGATT 
CTTGTGGAAA GGAATTTTCC TGTGGAGGAA TTACGCTTAT TAGCGACAAA ACGCTCCGCA 
GGCAAAAAGA TCCTTTGGCA AGGCAGGGAA ATTGAGGTTC AAGAAACTAC CCATGATAGT 
TTTAAAGGTA TCGATATAGC ATTATTTGCC GGAGGATCAT CCAGTACAGA ATTCGCTCCT 
TCCGCGGTTA AAAGCGGGGC TGTAGTGATT GATAACAGCA GTGCTTATCG TCTTGATCCT 
GAGGTCCCCC TGGTCGTACC TGAAGTCAAC CCGGAAGATG TAAAATGGCA TAAGGGGATC 
ATCGCTAATC CTAACTGTTC AACGATTATT ATGGCAGTCG CCTTGAAACC TATCTTTGAT 
CTGGCAGGGA TTAAAAGGGT GGTTGTGTCA ACCTATCAGG CCGTTTCCGG AGCAGGACGT 
GAAGGGATCG AAGAATTGGA AGATCAGGTT CGCAATTGGG TGCAAGGGGA AGAAGTGAAG 
AGTCAGACAT TCCCTTATCA AATTGCTTTT AACTTGATTC CCAGAATTGA TGTATTCCAA 
GAAGGAGATT ACACCAAAGA AGAGTGGAAG ATGGTTAAGG AGACTCAGAA GATTTTTCAT 
GTGGATACTA TGCCGATTAC GGCAACCACA GTCCGGGTTC CTGTGTTAAG AAGCCATTCC 
GAATCTATTA ACATAGAAAC AGAGCGGAGT GTCGGCTTGG ATGAGGTCAA GGCAGCTTTC 
CAAAAGGCTC CGGGAGTTAT CGTTGAGGAT AATCCGGCAG AAGATCGTTA TCCCATGCCT 
TGGTTTACTT CAGACACCGA TGAAGTCTAT ATAGGCCGTA TCCGTAAAGA TTTTTCCATT 
GAAAATGGGA TCAATCTCTG GGTTGTGGGT GACCAAATTC GTAAGGGAGC CGCCACCAAT 
ACGATACAGA TTGCCGAACT CTTATTATAG
 
Protein sequence
MPNVAIVGAT GAVGQEFLKI LVERNFPVEE LRLLATKRSA GKKILWQGRE IEVQETTHDS 
FKGIDIALFA GGSSSTEFAP SAVKSGAVVI DNSSAYRLDP EVPLVVPEVN PEDVKWHKGI 
IANPNCSTII MAVALKPIFD LAGIKRVVVS TYQAVSGAGR EGIEELEDQV RNWVQGEEVK 
SQTFPYQIAF NLIPRIDVFQ EGDYTKEEWK MVKETQKIFH VDTMPITATT VRVPVLRSHS 
ESINIETERS VGLDEVKAAF QKAPGVIVED NPAEDRYPMP WFTSDTDEVY IGRIRKDFSI 
ENGINLWVVG DQIRKGAATN TIQIAELLL