| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3628 |
|---|
| Symbol | |
|---|
| ID | 7260646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3852821 |
|---|
| End bp | 3853825 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643563550 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002460081 |
|---|
| Protein GI | 219669646 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | [TIGR00620] spore photoproduct lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00018062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTA TGCACCCTGA AAGGATCTAT TTTGAGCCGG CAGTTCTGAA TTATGAATTA
GGACGGCAAC TCCAGGCTAA ATACGCCACT GTTCCTTGGG AGCCAATCGA GAGCCATAAC
AATATTGAGA AATTGCGCAA GAATCCCAAT CAAGAGTTTC CGCGCATGAA GCGTCTGCTT
ATTCTCGGGG TTAGAAAATC GTTAAAGTAC ACTCCAAATC AAAAGGTTTC CGACTTTCTC
GTTCCCTATA CTTCCTCCGG TTGCAGTGCC ATGTGTCTTT ATTGCTACTT GGTATGCAAT
TACAATAAAT GCTCCTATCT GCGGCTGTTT GTAAACCGTG AACAGATGAT GGATAAATTG
ATCAAGACTG CTGATCAAGG GGAAGGTGAA CTGGTCTTTG AGATTGGCAG CAACAGTGAT
CTTGTTTTGG AAAATACCAT CACAGGAAAC CTGGAGTGGA CTATAGAAGA GTTTGCCAAA
AAGGAAAGAG GTTACCTGAC CTTTCCCACC AAGTTTGATC GGGTTGAACC GTTGTTGGCT
TTAAATCATC GGGAAAGAAT TATCTTTCGT ATGAGCGTAA ACCCTGAAGA GATCATTCAA
AAAGTGGAGT TGGGAACCTC GCCATTAAAG GCGAGGGTCC AAGCGCTGAA CCAAATGGCT
GAAGCAGGGT ACAAAGTGGG CATACTCATT GCCCCCGTGG TGCTGGTGGA GCATTGGCAA
GAACTTTATG CTCAATTGAT CGAGCAGCTG GCTGAGCTGA TCACCCCGCA AGCTAAGAAG
AAACTGTTTA TTGAAATCAT TTTCATGACC TACAGCTTTA TTCACCGGGC TATAAATCAA
GAGGCTTTTC CTAAAGCAGT TGAGTTATAC GATCAATCCC GCATGACGGG GAGAGGCCGG
GGAAAGTACT GGTACAAAGA AACAGTCCGG GTGAGTGGTG AAGAGTTCCT GCGGAAGGAA
CTGGCGGAAA AATTAAAGGG AATTCCGATC CTTTATGTGG TTTGA
|
|---|
| Protein sequence | MSFMHPERIY FEPAVLNYEL GRQLQAKYAT VPWEPIESHN NIEKLRKNPN QEFPRMKRLL
ILGVRKSLKY TPNQKVSDFL VPYTSSGCSA MCLYCYLVCN YNKCSYLRLF VNREQMMDKL
IKTADQGEGE LVFEIGSNSD LVLENTITGN LEWTIEEFAK KERGYLTFPT KFDRVEPLLA
LNHRERIIFR MSVNPEEIIQ KVELGTSPLK ARVQALNQMA EAGYKVGILI APVVLVEHWQ
ELYAQLIEQL AELITPQAKK KLFIEIIFMT YSFIHRAINQ EAFPKAVELY DQSRMTGRGR
GKYWYKETVR VSGEEFLRKE LAEKLKGIPI LYVV
|
|---|
| |