| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3618 |
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| Symbol | |
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| ID | 7260636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3842471 |
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| End bp | 3844678 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643563540 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_002460071 |
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| Protein GI | 219669636 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF
[COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000114723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGG GAAGTATCCT GAAATTAACA GCAGCCTTAT TGCTGATCGT CATCGCCGTA
GTATTCTCAA TTCAGCCCCT TACGGATTCA GAAAGGGGAA TTTCGTTAGG ACTTGACCTG
CGCGGAGGAG TTCACCTCGT CCTGCAAGCT GAACCTGGAC CTGACGGTGC AGCTATTACA
GCGGATGATG TGGAAAAGGC TAAAAGCATC ATTGAGAAAC GGGTCAATGA GATGGGGCTG
TCTGAGCCGG TCATTCAGGC TGATTTAGAT AAGAAGCGGA TTATTGTGGA TTTAGCCGGA
GTTCAGGACC CGGATAAAGC GGTAGAAGCT TTAAAGACGA CAGCAAAACT CACTTTTAAA
GATCCGCAAG GCAATGTGGT CATTGAAGGA GGGGATTTGA AAGATGCCCG TGCGGGACAG
GGAGAACGCA GTTATGTGGT TCATCTCACC TTCTCTCCGG AAGGAGCAAA GAAATTTGCA
GATGTGACCA GCCGTAATAT TGGTCAAAAC ATTGGCATTT ACTTAGATGA TCAGCTACTG
CAAAATCCTC AAGTACAGGC TGCCATTACC AATGGCCAGG CTGAAATCAC CGGGTATGCA
TCTCTGGAAG AAGCTGCTCA ATATGCAGTC TTGCTTCGTT CCGGCGCATT ACCTGTAAGC
TTAAGCATTG AAGAGAAACG TACTGTGGGA GCTTCGCTGG GTGTAGACTC CCTGAATAAG
AGTATCAATG CCGGTATTGT AGCTTTAGTA TTTATTCTTT TATTCATGCT GGTGCTCTAT
CGTCTCCCCG GACTTGTCGC GAATATCTCT TTGATTGTCT TTACCTTAAT TGTGTTGTGG
GCCTTGAAGG GATTTGGCGC CGTTCTGACC TTGCCGGGCA TAGCGGGGAT ACTTCTCTCC
ATCGGCATGG CGGTGGATTT AAACATTATT ATTTATGAGC GGATTAAAGA AGAGCTGCGC
CTGGGCAAAT CCCTGCGCGC CTCTGTGGAA GCCGGCTTCA GCCGCGCCTT TCTGACCGTC
TTTGACTCTA ATATTACCAC CTTATTTGCA GCGGCAACCC TCTTTTTCCT GGGCACAAGT
TCCATTAAAG GATTTGCCAT AACCTTGGGT ATCGGTATTT TTGCCAGCCT CTTTACGGCC
ATTACCTTTA CCCGGATGCT TTTACGCTGG ATAGTAGGTA TTAATCCGCG CATGAATACA
GCTTGGTTTG GCGTGAAAAG GGAAAACGAT GCTTCCGGAA AGAAAACCGG GGAAGCAACG
CCTGCGACTC AGGCAGCTAC CTATGAAGAT GTTAAGGCAT CCATGCCTTT CTATTTCAAT
GTAGTGAAAC GCCGGTATAT CTGGTTTGCT CTATCCTTAA TTATGATTGC CGTCAGTTTG
GGCTCCCTCT TCACTCAGAA GCTGAATCTG GGAGTGGACT TTACCGGCGG CACCATGCTT
GATATGAAAT TCAGTCAGCA GGTTACCCAG GAAAAGATCA CCCAGGCTAT GGAATCCGTA
GGTCTGGAAG GACCGGTGGT GCAGCTTTCC GATAATGATA CGTCGGCTTT GATCCGGACC
TCTGCCTTGG AAGAAGACAA GCGCAACGAA TTGCTCACCG CCCTGCAGAC TCAGGTAGGA
GATTTTGATA AGGAATCCCT GAAAGAAGAC AAGGTCGGAC CGGCTATCGG CCAGGAGCTG
ACCGAGAACG CTTTCTTATC TCTGGCTATT GCAGCAGTCT TAATGCTGGT GTATATTGGC
TTCCGCTTCC AATTTGCTTA TGCTGTATCG GGAATTTTGG CTCTGGTGCA TGACGTGATC
ATCACCGTAG GGATATTCTC CCTGTTCCAA TGGGAAATCG ATGCGACCTT TGTAGCCGCT
ATCCTGACCA TCTTCGGATA TTCCATCAAT GATACAGTGG TTATTTTTGA CCGAATCAGA
GAAAATGAAC CTCGCCTAAA ACGAGGGGAC AGCTATGAGG ACATGGTGGA TAAATCCGTC
TGGCAGATGA TGGGGCGTTC GATCAAAACC GTCCTGACGG TTCTCATTTC CCTGCTGGCA
ATTTATATCC TCGGCGGCGA ATCAACCCAA GGATTTGCCT TAGCCATGCT GATTGGTGTC
ATAGCCGGAG CTTATTCTTC CGTCTTTAAT GCCAGCCAGA TTTTGGTCGA GATTAAAAAA
AGAATGAAGC CGAAAAGGGG CGGTAAGGCT GCCCGCACGA AAGCATAA
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| Protein sequence | MKRGSILKLT AALLLIVIAV VFSIQPLTDS ERGISLGLDL RGGVHLVLQA EPGPDGAAIT
ADDVEKAKSI IEKRVNEMGL SEPVIQADLD KKRIIVDLAG VQDPDKAVEA LKTTAKLTFK
DPQGNVVIEG GDLKDARAGQ GERSYVVHLT FSPEGAKKFA DVTSRNIGQN IGIYLDDQLL
QNPQVQAAIT NGQAEITGYA SLEEAAQYAV LLRSGALPVS LSIEEKRTVG ASLGVDSLNK
SINAGIVALV FILLFMLVLY RLPGLVANIS LIVFTLIVLW ALKGFGAVLT LPGIAGILLS
IGMAVDLNII IYERIKEELR LGKSLRASVE AGFSRAFLTV FDSNITTLFA AATLFFLGTS
SIKGFAITLG IGIFASLFTA ITFTRMLLRW IVGINPRMNT AWFGVKREND ASGKKTGEAT
PATQAATYED VKASMPFYFN VVKRRYIWFA LSLIMIAVSL GSLFTQKLNL GVDFTGGTML
DMKFSQQVTQ EKITQAMESV GLEGPVVQLS DNDTSALIRT SALEEDKRNE LLTALQTQVG
DFDKESLKED KVGPAIGQEL TENAFLSLAI AAVLMLVYIG FRFQFAYAVS GILALVHDVI
ITVGIFSLFQ WEIDATFVAA ILTIFGYSIN DTVVIFDRIR ENEPRLKRGD SYEDMVDKSV
WQMMGRSIKT VLTVLISLLA IYILGGESTQ GFALAMLIGV IAGAYSSVFN ASQILVEIKK
RMKPKRGGKA ARTKA
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